Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001835465.1_202016-10-24] 107 sequences; 45,820,083 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq41 98.7 7e-15 >seq41 Length=363786 Score = 98.7 bits (108), Expect = 7e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 435118 GGTCTTGGACCTTTTGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAAT 435177 |||||| |||| |||||| || ||||| | |||||||||||||||||| | ||| || Sbjct 177374 GGTCTTACGCCTTCTGAATTCTTTTTCCACGCCATGGCTGGTCGTGAAGGTCTCATTGAT 177433 Query 435178 ACAGCTATTAAAACTGCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAA 435237 || || | || |||||||| || ||||||||||| ||| || |||||| || ||| Sbjct 177434 ACTGCCGTCAAGACTGCTGAAACAGGTTATATTCAGAGACGTCTCGTCAAGGCTCTGGAA 177493 Query 435238 GATATTAAACAAGAATATGATGGTACAGT 435266 ||| | || |||| ||||| || || Sbjct 177494 GATCTCAATGCTCAATACGATGGAACTGT 177522 Score = 96.9 bits (106), Expect = 3e-14 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 |||||||| |||||| | |||| || ||||||||||||||||| || | ||||||||| Sbjct 175949 GGTAAAGAGGGTCGTCTGCGAGGCAACTTGATGGGAAAGCGTGTTGACTTTTCTGCACGT 176008 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || ||||| || ||| ||||| | | || | |||||||| ||||||| | |||| Sbjct 176009 ACCGTTATCACGGGAGATGCTAATTTGTCCCTTCACGAAGTTGGCGTTCCTCGTAGTATT 176068 Query 432408 GCGAAAAATCTTACTT 432423 || | | ||| |||| Sbjct 176069 GCTAGGACTCTGACTT 176084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740625146752182