Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20virens_20[genbank_20GCA_5F001835465.1_202016-10-24]
107 sequences; 45,820,083 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq93 280 2e-70
seq97 111 2e-19
>seq93
Length=305044
Score = 280 bits (310), Expect = 2e-70
Identities = 1157/1791 (65%), Gaps = 73/1791 (4%)
Strand=Plus/Plus
Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390
||||||| || ||| ||| |||| | || ||||||||||| ||||||||||| |
Sbjct 223871 TGAACTGGATGGGTGCAGCTGCGGCCTGGGTACGAAGATAGTACATGCCGGTCTTGAGAC 223930
Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGA 110450
| | ||||| | | ||||| | | |||| ||| || || | ||||
Sbjct 223931 CAAGCTTCCAGCCAGTGAAGTGCATGCTGGTAATCTTGCCCATTGTGGGGTCCTTCATGT 223990
Query 110451 AGAGGTTCAT--ACTTTGACTTTGGTCAATGAA-GCGCCCCCGTTGTGCCGCCATATCAA 110507
|| ||||| ||| |||| |||||||||| || || | || | |||||||| |
Sbjct 223991 GGATGTTCAGGGACTGGGACT--GGTCAATGAAAGCACCACGGTCG-GCCGCCATCTG-- 224045
Query 110508 TGACATCCTTCATCTTA---ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTG 110564
|||| | || | || ||||| || || || | ||||||||| || |
Sbjct 224046 -GACAATTTGGCGCTGAGAAATCTCCCAGACGGTCTTGTACAATGCCTTGATATCCTCGG 224104
Query 110565 GGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCT 110624
|||| | | ||| ||||| ||||| || | | | || | | |||||| | |
Sbjct 224105 GGATGTTGGGGATGTTCTGAATGGAGCCGTTCTCAGCAATAATACGGTTCTTCATGGCAT 224164
Query 110625 TGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACT 110684
||||||||| ||| | | ||||| |||| || |||||||| ||||
Sbjct 224165 CGGACCAGAGGCCAGTGTCGACCAGGTCCTTGAGAAGCCAAGGGTTGACAACCTGGAACT 224224
Query 110685 CACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTAT 110744
| || || ||| | | | |||||||||| | ||||| || || ||||| ||||| |
Sbjct 224225 CGCCGGCAAGGACACGGCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCATTGT 224284
Query 110745 TACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAA 110804
| |||| ||| || | ||| ||| |||||||| || || | | | ||||| || |
Sbjct 224285 TGCCCAGGATCTGGGAAGTGCTGGCAGTTGGCATAGGGGCAACGAGCAAGCTGTTGCGCA 224344
Query 110805 GACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA---GTTG-AGCTTGGTT 110860
||| | ||||||||| | ||||||||| ||||| || | || | || || |
Sbjct 224345 CACCGTGCTCCTTGATCTGCTCCTTGAGAGAGTCCCACTCCCACAAGTCGGAG---GGCT 224401
Query 110861 TCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTT 110920
| || | |||||||||| || ||||| | || | || || || || |||| || | |
Sbjct 224402 TGACAT-CCCACATGTCGAATTGAAGGATGCCCTCAGATGCAGGTGATCCCTTGAATGAT 224460
Query 110921 TCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCTCGCCTCCAGGGATGCGTGATACAT 110979
| |||| || | | | | || | || | || ||||| |||| ||||| || ||
Sbjct 224461 TGGTAGGGGCCCTCGACCTTGGCAATCTCCATAGAA-GCCTCAAGGGCAGCGTGGTAGAT 224519
Query 110980 GGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAG 111034
|| |||||||| | |||| ||| || ||| || ||||| |||| ||
Sbjct 224520 TGTCTCAAAGATCTGCTTGTTCAGCTCGCGAGCCTCAGGAGACTCAAAAGGCATGCGCAG 224579
Query 111035 CGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGC 111094
|||| | || |||| || ||||| || ||||| | ||| ||||||||||| |||
Sbjct 224580 -GGCA----AGGAAAGCATCAGCAAGACCCTGGACACCAACACCGATAGGTCTGTGACGC 224634
Query 111095 ATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGA 111154
|| || || || || || || || || || ||||| | ||| ||
Sbjct 224635 ATGTTGCTGTTACGGGCCTCCTGGACAGGGTAGTGGTTCACATCAATAATCTTGTTCAGG 224694
Query 111155 TTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCT 111214
|| | ||| | ||| |||| ||| ||||| || | | | ||| | || | ||
Sbjct 224695 TTACGGACAACCACCTTGGTGACTTCGTGAAGCTTCTTAAAGTCATA---GCA---CCCT 224748
Query 111215 TCATTG------ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCA 111268
|| ||| ||||| || ||||| | || ||||| ||||| ||||| ||||
Sbjct 224749 TCGTTGTAGTCGACATAGGCAGGGAGGGCCAAAGAGGCCAAGTTGCAGACAGCAACCTCA 224808
Query 111269 TCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAA 111328
|| | |||||| | ||| || || || | ||| || || || || ||||
Sbjct 224809 TCAGGGGCACAGTACTCAATAATCTCAGTGCAGAGGTTAGAGCTGCGGATGGTACCCAGG 224868
Query 111329 TTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTC 111388
||||| ||||| ||||| |||||| ||||||||||||||| |||| | || |||
Sbjct 224869 TTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCAGTC 224928
Query 111389 TCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCG-GCTGGTACAATGGCGTTGG 111446
|| ||||| | || || || | | ||| | | || | | || | || | |||
Sbjct 224929 TCGGTCTGGGCTTCCAGGATGGAATACCACAGCTTCTGAGCGCGGATAGTCTTGCG--AC 224986
Query 111447 CCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCG 111505
| ||||||||| ||||||||| || | || || |||||||| ||| || |||
Sbjct 224987 CACGTCCCTCCTTCTCGTACTTCTCATACAAAGCCTCGAACTCCTC-GCCATAGCAGTCA 225045
Query 111506 GAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTC--CTCAACCC 111563
| || || || || || || || | || | ||| | ||| ||| |||||| |
Sbjct 225046 GCAAGGCCAGGGCACTCGTTGGGGCACATGAGCGTCCA--GTCCAAGTTCTTCTCAACAC 225103
Query 111564 GCTTCATGAAAAGGTCTGGAATCCACAG-GGATGAAAAGAGATCTCTA-CACCGAGCCTC 111621
|||||||||| || || |||||||| || | | | || || || | | ||| || ||||
Sbjct 225104 GCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAATAAG-TCGCGAGCACGGA-CCTC 225161
Query 111622 TTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTC 111681
|| | ||| ||||| || | ||||||||||| | || ||| ||||||||||||||
Sbjct 225162 CTCCTTACCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACATCAGCGTGCCATGGCTC 225221
Query 111682 AAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGC 111735
|| |||| || | | || ||||| ||| | || | || || | ||
Sbjct 225222 CAGGTAGATGGCAAAGGCACC---AGGACGCTTGTTGCCACCCTGGTCGACGTATCTGGC 225278
Query 111736 TGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCG 111795
||| ||| || || |||||||| ||||| ||||| | || ||| || || |||
Sbjct 225279 AGTGTTGTTGAAGACTCGAAGCATGGGAATGATACCGTTGGAAGTACCGTTGGTGCCCGC 225338
Query 111796 AATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTT 111855
||| ||| |||| | | |||| || || || || || |||||| |||
Sbjct 225339 AATGTAAGAACCGGTGGCACGGATGCGGTGGACGTTCAAGCCGATGCCGCCAGCCATCTT 225398
Query 111856 TGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTT 111915
|| || |||||| | | ||||| |||||||||| | || || ||||| |
Sbjct 225399 GGAAATCATGGCACACGTCTTCAGAGTGTCATAGATACCCTCAATGCTATCGTCCTTCAT 225458
Query 111916 GGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTG 111974
| | | | |||||| |||| ||| || || || |||||||| ||||||||||| |
Sbjct 225459 GTCAACCAAGAAGCATGAAGACAGCTG-GGCCTGCGGGGTACCAGCGTTGAAGAGGGTGG 225517
Query 111975 GTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATC 112032
| | ||||| ||| | | |||| ||||| || ||||||||||| |||| ||
Sbjct 225518 GGGAGGCGTGGGTGA--AGAACTTGCTCGACATGAGGTGGTATGTCTCCAGGACACGCTC 225575
Query 112033 AATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
|||||| || || |||||| | || || ||||| | ||||| ||||||
Sbjct 225576 AATGTCGTCTCCCCAGATGCCAACAGCCACTCGCATAATCATGTGCTGTGG 225626
>seq97
Length=261666
Score = 111 bits (122), Expect = 2e-19
Identities = 530/823 (64%), Gaps = 37/823 (4%)
Strand=Plus/Minus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| | || ||||||||||||||||||||||| ||| |||| |||||| ||||||
Sbjct 4046 TAGTCGGCAACACGCTTCTCAAAGAAGTTGGTCTTGCCACCAAGAGAAATGTTCTCCATA 3987
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAATGG----GTGGC--ACCCCAACTTGTTTGAGG 122484
|||||||| || || | || | || || || | |||| ||
Sbjct 3986 AAGTCAAAGGGGTTGGAAGACTTGTAGATCTTCTCGTTGCCGAGAGCAACA------AGC 3933
Query 122485 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGG 122544
|| || || | ||| |||| ||||||| |||| | |||||||| || | |||
Sbjct 3932 AGGCGGTCAGCAACAAACTCGATGTACTGCTTCATCAAGTTGGAGTTCATGCCCAGCAGG 3873
Query 122545 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 122604
|| ||||| || || | |||| ||| |||||| || || || | | ||||
Sbjct 3872 GCGCAGGGGAGAGCCTCGGTCAAGAACTCTTGCTCAATTCGGACAGCATCGGTGATGATG 3813
Query 122605 GCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACG---GCA 122661
| |||| || | ||| | || | | || | || || || | |||
Sbjct 3812 TCACGGATCACCTCCTTGCTGGCGCGGTT-CTTGAGGTG--GGAGTGCAACAGGCAGGCA 3756
Query 122662 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGC 122721
|| || ||| |||||||| || || || || || || || || ||| || || |||
Sbjct 3755 AAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGC 3696
Query 122722 ATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACC 122780
|||||||| |||||||| | ||| | || | ||| || | ||| ||||||||||||
Sbjct 3695 ATGAGACCTCGCTTCTTGAGCCAGAAGATGGATGCA-AAGGCGCCGCTGAAGAAGATACC 3637
Query 122781 CTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACC 122839
||| || ||||| |||| ||||| | || ||||| ||| ||| | | | ||
Sbjct 3636 CTCGACGGCAGCAAAGGCAACCAGGCGCTGAGCAAAGGA-AGAGTTCTTGTCCTGGATCC 3578
Query 122840 ATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC-TTCAA-- 122896
| || || ||||| | |||||||| ||| || || | ||| | ||||| || ||
Sbjct 3577 ACTTGATGGCCCAGTCAGCCTTCTTGCGAATGCAAGGGATAGTCTCAATGGCGTTGAAGA 3518
Query 122897 -ATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTT 122955
||| ||| | | | || ||||| ||||| |||| || | || || ||
Sbjct 3517 GATAGTTGC--GCTGGCTGTTC--TCCTTGATGTAGGTGTCGATGAGCAGGGAGTAGGTC 3462
Query 122956 TCGCCATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTAT 123014
||| || | | | ||| ||| | || | ||||||| | || || ||| ||
Sbjct 3461 TCGGAGTGGATGTTCTCCATCATGATCTGGA-AGCCGTAGAAGCATCGAGCCTCGGGGAT 3403
Query 123015 CTGAACCTCATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 123073
||| ||||| |||| || | | | ||||| ||||| ||||| || | |
Sbjct 3402 CTGGACCTC-GCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCGG 3344
Query 123074 CAAAGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCC 123130
||||||| |||||||||| ||||| | ||| || | || |||| || | ||||
Sbjct 3343 CAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCC 3284
Query 123131 AGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173
|||||| ||||| ||||||| |||| ||||| || |||||
Sbjct 3283 AGTCGTGCAGATCCTTGGACAGGTCAATCTCTTCGGCGGTCCA 3241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031160007200
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