Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001835465.1_202016-10-24] 107 sequences; 45,820,083 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1 147 7e-30 seq96 125 2e-23 seq82 125 2e-23 seq41 102 2e-16 seq47 86.0 2e-11 >seq1 Length=17084797 Score = 147 bits (162), Expect = 7e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| || ||||||||||| || ||||| || || || Sbjct 3412328 CATACCACCACGAAGACGAAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTC 3412387 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | ||||| ||||| ||||| || || ||||| ||||| || || ||||| ||||| Sbjct 3412388 GGAGAGGGTTCGGCCATCCTCAAGCTGCTTACCAGCGAAGATGAGTCGCTGCTGGTCAGG 3412447 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || ||||| || || | || ||||| || || | |||||| | || Sbjct 3412448 AGGAATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTATCAGAAGACTC 3412507 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || || || || | ||||||||||| || || || || Sbjct 3412508 CACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGAC 3412546 Score = 147 bits (162), Expect = 7e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| | || ||||||||||| || || || || || || Sbjct 3412614 CATACCACCACGAAGGCGGAGAACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 3412673 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | ||||| || || || ||||| || ||||||||||| ||||| ||||| ||||| Sbjct 3412674 GGACAGAGTTCGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGG 3412733 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || || |||||||| || | || ||||| || || | || |||| || Sbjct 3412734 AGGGATACCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCGATGGTGTCGGATGACTC 3412793 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | ||||| ||||| || || || || || || ||||| Sbjct 3412794 CACCTCAAGGGTGATAGTCTTACCGGTCAGGGTCTTGACGAAGATTTGCAT 3412844 Score = 140 bits (154), Expect = 1e-27 Identities = 172/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || ||||| ||||| || ||| || ||||| || | Sbjct 3412096 TTTGCATACCACCACGGAGACGGAGGACAAGGTGAAGTGTGCTCTCCTTCTGAATGTTGT 3412155 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || || || || || ||||| || || ||||||||||| ||||| ||||||| Sbjct 3412156 AGTCGCTCAAAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGAT 3412215 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || || || || ||||||||||| || | || ||||| || || | |||||| | Sbjct 3412216 CCGGGGGGATACCCTCCTTATCCTGAATCTTTGACTTGACATTGTCGATGGTATCAGAAG 3412275 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || | ||||| || || || || || || ||||||||||| Sbjct 3412276 ACTCCACCTCGAGGGTGATAGTCTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 3412330 Score = 125 bits (138), Expect = 2e-23 Identities = 471/732 (64%), Gaps = 14/732 (2%) Strand=Plus/Minus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCG-TGTAGA 349263 || ||||| | |||||||| || ||||| || | | | | | | || || ||| || Sbjct 16666337 GGTATCGACCTGGGTACTACGTACTCTTGCGTCGGTATCTTCCGTGAGGACCGATGT-GA 16666279 Query 349264 AATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAAC 349323 || || || || || || |||||| |||| || || || | |||||| || ||||| || Sbjct 16666278 TATCATCGCCAACGACCAGGGTAACCGAACGACCCCTTCGTTCGTTGCCTTCACCGACAC 16666219 Query 349324 TGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGT 349383 |||||| |||| |||||| | || || || || | || || || | || || || Sbjct 16666218 CGAGCGTCTGATCGGTGATGCGGCCAAGAACCAGGTCGCCATGAACCCCCAGAACACCGT 16666159 Query 349384 TTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACAATCTG 349439 || || || |||||| | || || | | ||| | ||| | || || ||| Sbjct 16666158 CTTCGACGCCAAGCGATTGATCGGACGCAAGTTTGCCGACTCCGAGGTC----CAGGCTG 16666103 Query 349440 ATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGG 349499 || | || || || || || | | | || | ||| || || || | | |||| Sbjct 16666102 ATATGAAGCACTTCCCCTTCAA-GATCATCGACAAG--GGCTCCAAGCCCGTCGTCGAGG 16666046 Query 349500 TTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAG 349559 |||| | || || || | || || ||||| || || || || ||| | | Sbjct 16666045 TTGAGTTCAAGGGCGAGAAGAAGACCTTCACCCCCGAGGAGATCTCCTCCATGATCCTGA 16665986 Query 349560 TTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTA 349619 || ||| || | ||| || | || | || || || | | || || || | Sbjct 16665985 CCAAGATGCGTGAGACTGCCGAGTCCTACCTCGGAACCACCGTCAACAACGCCGTCATCA 16665926 Query 349620 CTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTG 349679 |||| || ||||| || || || ||||||| || || || || || || ||||| Sbjct 16665925 CTGTCCCCGCCTACTTCAACGACAGCCAGCGTCAGGCTACCAAGGACGCCGGTCTCATTG 16665866 Query 349680 CGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGC 349739 | || | || || || | || || || || ||||| ||||| || || || || || | Sbjct 16665865 CCGGTCTTAACGTCCTGCGTATCATCAACGAGCCCACCGCTGCTGCCATCGCCTACGGCC 16665806 Query 349740 TTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTT 349799 |||| || | | || || || | || || || ||| | ||||||||||| | Sbjct 16665805 TTGACAAGAAGGTCGAGGGTGAGCGCAACGTCCTCATCTTCGATCTCGGTGGTGGTACCT 16665746 Query 349800 TTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTG 349859 | ||||| || || || || |||| ||||| || || || || || | ||||| |||| Sbjct 16665745 TCGATGTCTCTCTCCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGTCCACTGCCGGTG 16665686 Query 349860 ATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAAT 349919 | || || | ||||| |||||||| || || ||||| || || || ||||| || | Sbjct 16665685 ACACCCACTTGGGTGGTGAAGATTTCGACAACCGTCTGGTCAACCACTTCGTTAACGAGT 16665626 Query 349920 TTAAGCGTCAAG 349931 ||||||| |||| Sbjct 16665625 TTAAGCG-CAAG 16665615 Score = 100 bits (110), Expect = 9e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || || || || |||||||| || || || || || || Sbjct 1761285 ACCACCACGCAGGCGCAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGCT 1761226 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || ||||| || || || || ||||| ||||| | || ||||| || || || Sbjct 1761225 CAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCCGGGGG 1761166 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||| || || || ||||| || || | || ||||| || || | || || | || || Sbjct 1761165 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCAC 1761106 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| || || || || || || ||||||||||| Sbjct 1761105 CTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 1761058 Score = 91.5 bits (100), Expect = 4e-13 Identities = 161/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||||| |||||||| | | || || | || || || ||| || || || || | Sbjct 3411868 TTTACTGGCCACCACGAAGGCGAAGGACCAAGTGCAGTGTGCTCTCCTTCTGGATGTTGT 3411927 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || || || || ||||| || || || ||||| ||||| | || ||||| | Sbjct 3411928 AGTCGCTCAAGGTGCGACCGTCTTCCAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGT 3411987 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||||||||| || || || || || || || | || || || || || | |||||| | Sbjct 3411988 CAGGAGGAATGCCCTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAG 3412047 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || | ||||| ||||| || || || ||||| || ||||| Sbjct 3412048 ACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 3412102 >seq96 Length=287210 Score = 125 bits (138), Expect = 2e-23 Identities = 471/732 (64%), Gaps = 14/732 (2%) Strand=Plus/Plus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCG-TGTAGA 349263 || ||||| | |||||||| || ||||| || | | | | | | || || ||| || Sbjct 46631 GGTATCGACCTGGGTACTACGTACTCTTGCGTCGGTATCTTCCGTGAGGACCGATGT-GA 46689 Query 349264 AATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAAC 349323 || || || || || || |||||| |||| || || || | |||||| || ||||| || Sbjct 46690 TATCATCGCCAACGACCAGGGTAACCGAACGACCCCTTCGTTCGTTGCCTTCACCGACAC 46749 Query 349324 TGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGT 349383 |||||| |||| |||||| | || || || || | || || || | || || || Sbjct 46750 CGAGCGTCTGATCGGTGATGCGGCCAAGAACCAGGTCGCCATGAACCCCCAGAACACCGT 46809 Query 349384 TTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACAATCTG 349439 || || || |||||| | || || | | ||| | ||| | || || ||| Sbjct 46810 CTTCGACGCCAAGCGATTGATCGGACGCAAGTTTGCCGACTCCGAGGTC----CAGGCTG 46865 Query 349440 ATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGG 349499 || | || || || || || | | | || | ||| || || || | | |||| Sbjct 46866 ATATGAAGCACTTCCCCTTCAA-GATCATCGACAAG--GGCTCCAAGCCCGTCGTCGAGG 46922 Query 349500 TTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAG 349559 |||| | || || || | || || ||||| || || || || ||| | | Sbjct 46923 TTGAGTTCAAGGGCGAGAAGAAGACCTTCACCCCCGAGGAGATCTCCTCCATGATCCTGA 46982 Query 349560 TTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTA 349619 || ||| || | ||| || | || | || || || | | || || || | Sbjct 46983 CCAAGATGCGTGAGACTGCCGAGTCCTACCTCGGAACCACCGTCAACAACGCCGTCATCA 47042 Query 349620 CTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTG 349679 |||| || ||||| || || || ||||||| || || || || || || ||||| Sbjct 47043 CTGTCCCCGCCTACTTCAACGACAGCCAGCGTCAGGCTACCAAGGACGCCGGTCTCATTG 47102 Query 349680 CGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGC 349739 | || | || || || | || || || || ||||| ||||| || || || || || | Sbjct 47103 CCGGTCTTAACGTCCTGCGTATCATCAACGAGCCCACCGCTGCTGCCATCGCCTACGGCC 47162 Query 349740 TTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTT 349799 |||| || | | || || || | || || || ||| | ||||||||||| | Sbjct 47163 TTGACAAGAAGGTCGAGGGTGAGCGCAACGTCCTCATCTTCGATCTCGGTGGTGGTACCT 47222 Query 349800 TTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTG 349859 | ||||| || || || || |||| ||||| || || || || || | ||||| |||| Sbjct 47223 TCGATGTCTCTCTCCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGTCCACTGCCGGTG 47282 Query 349860 ATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAAT 349919 | || || | ||||| |||||||| || || ||||| || || || ||||| || | Sbjct 47283 ACACCCACTTGGGTGGTGAAGATTTCGACAACCGTCTGGTCAACCACTTCGTTAACGAGT 47342 Query 349920 TTAAGCGTCAAG 349931 ||||||| |||| Sbjct 47343 TTAAGCG-CAAG 47353 >seq82 Length=456978 Score = 125 bits (138), Expect = 2e-23 Identities = 471/732 (64%), Gaps = 14/732 (2%) Strand=Plus/Plus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCG-TGTAGA 349263 || ||||| | |||||||| || ||||| || | | | | | | || || ||| || Sbjct 277946 GGTATCGACCTGGGTACTACGTACTCTTGCGTCGGTATCTTCCGTGAGGACCGATGT-GA 278004 Query 349264 AATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAAC 349323 || || || || || || |||||| |||| || || || | |||||| || ||||| || Sbjct 278005 TATCATCGCCAACGACCAGGGTAACCGAACGACCCCTTCGTTCGTTGCCTTCACCGACAC 278064 Query 349324 TGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGT 349383 |||||| |||| |||||| | || || || || | || || || | || || || Sbjct 278065 CGAGCGTCTGATCGGTGATGCGGCCAAGAACCAGGTCGCCATGAACCCCCAGAACACCGT 278124 Query 349384 TTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACAATCTG 349439 || || || |||||| | || || | | ||| | ||| | || || ||| Sbjct 278125 CTTCGACGCCAAGCGATTGATCGGACGCAAGTTTGCCGACTCCGAGGTC----CAGGCTG 278180 Query 349440 ATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGG 349499 || | || || || || || | | | || | ||| || || || | | |||| Sbjct 278181 ATATGAAGCACTTCCCCTTCAA-GATCATCGACAAG--GGCTCCAAGCCCGTCGTCGAGG 278237 Query 349500 TTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAG 349559 |||| | || || || | || || ||||| || || || || ||| | | Sbjct 278238 TTGAGTTCAAGGGCGAGAAGAAGACCTTCACCCCCGAGGAGATCTCCTCCATGATCCTGA 278297 Query 349560 TTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTA 349619 || ||| || | ||| || | || | || || || | | || || || | Sbjct 278298 CCAAGATGCGTGAGACTGCCGAGTCCTACCTCGGAACCACCGTCAACAACGCCGTCATCA 278357 Query 349620 CTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTG 349679 |||| || ||||| || || || ||||||| || || || || || || ||||| Sbjct 278358 CTGTCCCCGCCTACTTCAACGACAGCCAGCGTCAGGCTACCAAGGACGCCGGTCTCATTG 278417 Query 349680 CGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGC 349739 | || | || || || | || || || || ||||| ||||| || || || || || | Sbjct 278418 CCGGTCTTAACGTCCTGCGTATCATCAACGAGCCCACCGCTGCTGCCATCGCCTACGGCC 278477 Query 349740 TTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTT 349799 |||| || | | || || || | || || || ||| | ||||||||||| | Sbjct 278478 TTGACAAGAAGGTCGAGGGTGAGCGCAACGTCCTCATCTTCGATCTCGGTGGTGGTACCT 278537 Query 349800 TTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTG 349859 | ||||| || || || || |||| ||||| || || || || || | ||||| |||| Sbjct 278538 TCGATGTCTCTCTCCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGTCCACTGCCGGTG 278597 Query 349860 ATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAAT 349919 | || || | ||||| |||||||| || || ||||| || || || ||||| || | Sbjct 278598 ACACCCACTTGGGTGGTGAAGATTTCGACAACCGTCTGGTCAACCACTTCGTTAACGAGT 278657 Query 349920 TTAAGCGTCAAG 349931 ||||||| |||| Sbjct 278658 TTAAGCG-CAAG 278668 >seq41 Length=363786 Score = 102 bits (112), Expect = 2e-16 Identities = 188/273 (69%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 378175 ACAGTCATATCATATCTAACCATTAA-ATCTTCTAATGCTTTAATAAGTCGTCGAGAAAT 378233 ||||| ||| ||| | | |||| | |||||| | || || | || |||| ||| Sbjct 177522 ACAGTTCCATCGTAT-TGAGCATTGAGATCTTCCAGAGCCTTGACGAGACGTCTCTGAAT 177464 Query 378234 ATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGC 378293 |||||| |||| | ||| || || ||||||||||| | ||| |||||||| |||| || Sbjct 177463 ATAACCTGTTTCAGCAGTCTTGACGGCAGTATCAATGAGACCTTCACGACCAGCCATGGC 177404 Query 378294 ATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCT 378353 ||||| || ||||||| ||| ||||| |||| | | || |||| | || || | Sbjct 177403 GTGGAAAAAGAATTCAGAAGGCGTAAGACCACGGAGGTAAGAGTTCTCGACGAAGCCACG 177344 Query 378354 TGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATA 378413 || | || || | ||| | ||| || |||| || | || || | | || ||| | Sbjct 177343 GGCCTCAGGTGAGTAATCGTCTTTGGTGAAATGGGGCAGAGTTCGGTATTTGAAGCCAAA 177284 Query 378414 TGGAATTCGTTTTCCATCAACATTCTGTTGACC 378446 |||||| || ||||| || ||| |||| || || Sbjct 177283 TGGAATACGCTTTCCTTCGACAATCTGCTGTCC 177251 Score = 100 bits (110), Expect = 9e-16 Identities = 120/159 (75%), Gaps = 7/159 (4%) Strand=Plus/Minus Query 377432 CAGATAATGATAATATTTCTTCAATGCGTGGCACACCACGTGTAACATTCGATTTAGATG 377491 ||||| ||| ||| || ||| | | || |||||||| | || || ||| || || | Sbjct 178279 CAGAT--TGAGAAT-TTCCTTGAGT-CGAGGCACACCGAGCGTGACGTTC---TTGGAAG 178227 Query 377492 CAACACCAGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACT 377551 ||||||||||||||||| || || || || | || || | |||||||||||| |||| Sbjct 178226 ACACACCAGCAAAGTGGAAGGTGTTCAGTGTCATCTGGGTGGCGGGCTCACCAATAGACT 178167 Query 377552 GCGCTGCAATAACGCCAACCATTTCTCCAGGATTGACAA 377590 | || |||| |||||||||||||| ||||| || |||| Sbjct 178166 GAGCAGCAAGGACGCCAACCATTTCACCAGGGTTAACAA 178128 Score = 84.2 bits (92), Expect = 7e-11 Identities = 191/284 (67%), Gaps = 5/284 (2%) Strand=Plus/Plus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 ||||| || ||||| || ||||| || || || ||||||| || || || |||||| Sbjct 163717 GCTGTCATCACTGTCCCTGCCTACTTCAACGACAACCAGCGTCAGGCTACCAAGGATGCT 163776 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || | || || || | || || || || ||||| ||||| || || Sbjct 163777 GGTGCCATTGCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACCGCTGCTGCTATC 163836 Query 349730 GCATATGGGCT---TGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786 || || || || || | | || |||| | || || | || || | ||| | Sbjct 163837 GCCTACGGTCTGGGTGCTGGCAAGACTGACAAGGAGCGCAACGTCCTGATCTACGATCTT 163896 Query 349787 GGTGGTGGTACTTTTGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTTAA 349845 |||||||||||||| ||||| || || || |||| | | | || |||| || || Sbjct 163897 GGTGGTGGTACTTTCGATGTCTCCCTGCTCAACA-TCCAGGGTGGTGTTTTCACCGTCAA 163955 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 || || |||||||| || || | ||||| | || ||||||| Sbjct 163956 GGCTACCGCTGGTGACACCCACTTGGGTGGCCAGGACTTTGATA 163999 >seq47 Length=144723 Score = 86.0 bits (94), Expect = 2e-11 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 || || || || || || || | ||||| ||||| || || || || ||||||||||| Sbjct 138396 TTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATC 138455 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 | || ||||| || || ||||| || || || ||||| || || | || ||||| || Sbjct 138456 AATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 138515 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729 |||| || || | || || ||||| || | ||||| || || || || || || ||| Sbjct 138516 ATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAA 138575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515252322680921