Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq141 156 4e-33 >seq141 Length=465755 Score = 156 bits (172), Expect = 4e-33 Identities = 577/888 (65%), Gaps = 31/888 (3%) Strand=Plus/Plus Query 16652 TGTTTATGAACAACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTT 16711 |||| |||| || || || |||| |||| ||| ||||| || ||||||||||| || Sbjct 372038 TGTTCATGA-CACCAGCC-TTCT--GGTAGTCGGCGACGCGCTTCTCGAAAAAGTTGGTC 372093 Query 16712 TTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTT 16769 ||||| | ||||| || ||||||||||| ||||| || || | || || | || || Sbjct 372094 TTGCCGCCAAGAGAAATGTTCTCCATGAAGTCAAAGGGGTTGGCAGACTTGTAGATCTTC 372153 Query 16770 TAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTA 16829 | | | || || || | | | | || || ||||| || || || || ||| | Sbjct 372154 TCG--TTGCCGAGAGCGACAAGCAGACGGTCGGCAACAAACTCGATGTACTGCTTCATCA 372211 Query 16830 ATTCGCAGTTCATTCCTATAAGA-CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCT 16888 | | ||||||| || | || || | ||| |||| || ||||| ||| ||||| Sbjct 372212 GGTTGGAGTTCATGCCGAGCAGGGCGCAGGGGA-GAGCCTCGGTCAAGAATTCCTGCTCA 372270 Query 16889 ATAACAACCGCTTCCTTAATAAT---ACT-AGCAACTCGTTCCTCGGACGGTGTATGTTT 16944 || || || || | || || || | || ||| || || | ||||| || Sbjct 372271 ATTCGGACAGCATCAGTGATGATGTCACGGATCACCTCCTTGCTGGCACGGTTCTTG--- 372327 Query 16945 AAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAG 17004 || || || ||| || || || ||| || | |||||||| | ||| || Sbjct 372328 -AGGTGAGAGTGCAGCAGGCAGGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAG 372386 Query 17005 TTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGC 17064 ||||| ||||| |||| || ||||| ||||| ||||| | ||| || || | ||| Sbjct 372387 CTCGTTGGAAAAGGTCAGACCAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGC 372446 Query 17065 GAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTA 17124 || | || ||||| ||||||||||||| ||||| || | | || | ||| | Sbjct 372447 AAAAGCACCGCTGAAGAAGATACCCTCGACGGCGGCAAAGGCAACCAGGCGCTGGGCAAA 372506 Query 17125 CGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTT-TTGCTTTATGCAAT 17183 | | || |||| | ||||| || |||| ||||| || |||| |||||| Sbjct 372507 GGAAGAGTTCTTGTCCTGGATCCACTTGATGGCCCAGTCGGCCTTCTTGCGG-ATGCAAG 372565 Query 17184 CCATCGTTTCTATGGCCTTAAATAATTT-CTCTTTTTCCTGTAGGTCGATTATATACGTA 17242 || || || ||||| || || | | || | |||| || | || || || Sbjct 372566 GAATGGTCTCAATGGCGTTGAAGAGGTAGCTGCGCTGGCTGTTC-TCCTTGATGTAGGTG 372624 Query 17243 TCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAA 17302 |||||||| ||| ||| | |||||||| ||||||||||| ||||| || ||||| Sbjct 372625 TCGATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAG 372684 Query 17303 AAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTC 17362 |||||||| || || | || || || || || ||| || || | || || ||||| Sbjct 372685 AAGCATCGAGCCTCGGGGATCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTG 372744 Query 17363 ACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCC 17422 || |||||||| ||||| || || |||| || || ||||| || || ||||| Sbjct 372745 ACAATGCCGTCAGAGGCGGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCA 372804 Query 17423 GGTGTAAGAACGCG------CCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGG 17476 | || ||| |||||| | | ||| ||||| | ||| | ||||||| | Sbjct 372805 TCGTTCAG---GCGGTTGTTCCAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCG 372861 Query 17477 GTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTG 17524 ||||| || ||| | ||||| || ||||| | ||| || | |||| Sbjct 372862 GTCCAGAAGGAGGCCTCGGCCTTCTTGTACATTTGCCAGATCTAATTG 372909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544325543960