Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq131 95.1 1e-14 >seq131 Length=1298602 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 142994 TCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAG 143053 || || || |||||||| ||||||| |||| ||| || || || || |||||| || Sbjct 570719 TCCTTCTGAATGTTGTAGTCGCTCAAGGTGCGACCGTCCTCAAGCTGCTTGCCAGCAAAG 570778 Query 143054 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 143113 || ||||| |||||||| || || || || || ||||| ||| ||| || | | Sbjct 570779 ATAAGACGCTGCTGATCCGGGGGAATACCCTCCTTGTCCTGAATCTTTGACTTGACATTG 570838 Query 143114 TCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACG 143173 || | ||||| | | ||| || || | || | |||||||||||||| || || ||| Sbjct 570839 TCGATGGTGTCTGATGATTCAACCTCCAATGTGATGGTCTTGCCGGTCAACGTCTTGACG 570898 Query 143174 AATATTTGCATA 143185 || || |||||| Sbjct 570899 AAGATCTGCATA 570910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507013151477040