Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq187 107 2e-18 >seq187 Length=1433483 Score = 107 bits (118), Expect = 2e-18 Identities = 122/162 (75%), Gaps = 4/162 (2%) Strand=Plus/Plus Query 5594 AGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAA--GTTGAACA 5651 ||||| || ||||| |||||| ||| | |||| | ||| | | ||| | |||||||| Sbjct 948657 AGCTGGGCAATTCGATCGCCCTCCTTGATCTCGTAGTCGGTTT--CCGCATGGTTGAACA 948714 Query 5652 GCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGA 5711 | | || ||| |||||||||||| ||||| || ||||| || || |||||||| Sbjct 948715 GAAGAACCTTGACGGGGCCGCGGTAGTCTGCGTCGATGACGCCTGCACCAGTGTCGATGA 948774 Query 5712 AGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 |||||||| ||| ||||| ||||||||||| | ||||||| Sbjct 948775 AGTGCTTGGACGCAAGGCCAGAGCGGGGAGCAATACGGCCGT 948816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430053367466264