Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq141 91.5 1e-13 >seq141 Length=465755 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| ||| | || || || || ||||| || |||||||| ||||||| ||||| | Sbjct 372057 CTGGTAGTCGGCGACGCGCTTCTCGAAAAAGTTGGTCTTGCCGCCAAGAGAAATGTTCTC 372116 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || || || || || |||| ||| | ||| |||| ||| | ||| | ||| Sbjct 372117 CATGAAGTCAAAGGGGTTGGCAGACTTGTAGATCTTCTCGTTGCCGAGAGCGACAAGCAG 372176 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACAT-GGATTGCGAATTCATGCCCAACATAG 119820 || || || |||||||||||||| | ||| | ||| || |||||||| | || | Sbjct 372177 ACGGTCGGCAACAAACTCGATGTACTGCTTCATCAGGTTG-GAGTTCATGCCGAGCAGGG 372235 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAAT 119857 || || | ||| | ||| ||||| |||| ||||| Sbjct 372236 CGCAGGGGAGAGCCTCGGTCAAGAATTCCTGCTCAAT 372272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478661221293840