Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq7 354 2e-92 >seq7 Length=2436850 Score = 354 bits (392), Expect = 2e-92 Identities = 1073/1636 (66%), Gaps = 46/1636 (3%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| || ||| | || || ||| ||||||||| || | | | ||| |||| || Sbjct 486452 TTCACCCATGCCTCCCCCACCCTGTTCAATGCTGGTACCCCGCAGGCCCAGCTGTCCTCA 486511 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| | | | |||||||||||| ||| |||||||||| |||||| || |||| Sbjct 486512 TGCTTCTTGGTCGACATGAAGGACGATAGCATTGAGGGTATCTATGACACTCTGAAGACA 486571 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 ||||| | |||||||||| || || || || || | | || ||||| | ||||| Sbjct 486572 TGTGCCATGATTTCCAAGATGGCTGGTGGTATCGGCTTGAACG-TCCACCGCATCCGTGC 486630 Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 || | | ||||||| ||||| || ||| || || | |||||||||||| Sbjct 486631 CACCGG-CTCTTACATTGCTGGCACCAACGGTACCTCCAACGGTATTATTCCCATGCTTC 486689 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 | || || |||| ||||| || || |||||||||||||| ||||| || || | Sbjct 486690 GAGTCTTCAACAACACTGCCAGATATGTCGACCAGGGTGGTAACAAGCGTCCTGGTGCCT 486749 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 |||| || || |||||||| || ||||| | ||||| || ||||| ||||| || | Sbjct 486750 TTGCCATCTACCTCGAGCCCTGGCACGCCGACGTCTTTGAATTCCTTGATCTCCGCAAGA 486809 Query 363905 AC-ACGGGAA--AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTG 363961 || |||| || |||||| | || || || || ||||| ||| || ||| || | | Sbjct 486810 ACCACGGCAAGGAAGAGG---TCCGCGCTCGCGACTTGTTCCTTGCTCTCTGGATTCCCG 486866 Query 363962 ACCATTTTATGAAGCGCGTGGAGGCAGGTAA--GAATTGGTCACTCTTTTGCCCACACGA 364019 | | || |||||||| || ||| | | | | | ||| | ||| | ||||| |||| Sbjct 486867 ATCTCTTCATGAAGCGTGTTGAG--AAGAACTTGGACTGGACGCTCATGTGCCCCAACGA 486924 Query 364020 ATGTCCAGGTCTTTCCGA-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTAT 364077 ||| || || ||| | || || ||||| | | || | | ||||| || || ||||| Sbjct 486925 ATGCCCTGGCCTTGCTGACTGCTATGGCGAG--GAATTCGAGGCTCTGTATGAGAAGTAC 486982 Query 364078 GAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137 || ||||||| | ||| ||||| || | || |||||||| |||| | ||||| || Sbjct 486983 GAGAAGGAGGGACGTGGTCGCAAGACCATCCGTGCTCAGAAGCTGTGGTATTCCATCCTG 487042 Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197 || | |||| || || || | |||| ||| | ||||| ||| | |||||||||||| Sbjct 487043 GAAGCCCAGACCGAAACTGGTAACCCCTTCATGCTCTACAAGGATGCCTGCAACCGCAAG 487102 Query 364198 TCCAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGA 364256 ||||||| || |||| || || | || |||| |||||| || ||||||||||| || Sbjct 487103 AGCAACCAGAAGAACCTGGGAACCA-TCCGCAGCTCCAACCTCTGCACCGAGATTATCGA 487161 Query 364257 ATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTT 364316 ||| || || || ||| ||| || || ||| | || || | || || || || | Sbjct 487162 GTACTGTGCCCCAGATGAGGTTGCTGTTTGCAACTTGGCCTCTTTGGCCCTCCCTGCTTA 487221 Query 364317 TGT------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGC 364370 ||| || || || | ||| || | || |||| || ||| | | Sbjct 487222 TGTCGACTACAACGAAGGCTGCTACGACTTTAAGAAGCTCCATGAAGTCACCAAGGTGGT 487281 Query 364371 TACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCG 364430 | |||| || ||||| | || || || | || || | | || ||| Sbjct 487282 TGTCCGCAACCTTAACAAGATCATTGATGTCAACCACTACCCTGTCCAGGAGGCCCGCAA 487341 Query 364431 TTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTAT 364490 || ||||| || || || |||||| ||||||| ||||| || || |||| ||| | Sbjct 487342 CAGCAACATGCGCCACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCCGACGCTTTCCT 487401 Query 364491 GATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGA 364550 || ||| | ||||| || || || |||||| || || ||| |||||||||| Sbjct 487402 TGCCCTGCGCATGCCCTTTGAGTCTCCCGAGGCTCGTCAGCTGAACAAGCAGATCTTTGA 487461 Query 364551 AACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGG-GAAAGT 364609 || || || ||| || | ||||| | ||| | |||||| | | | Sbjct 487462 GACCATCTACCATGCGGCCCTTGAGGCTTC------TATGGAGATCGCCAAGGTGGAGGG 487515 Query 364610 ACTCTACTTAT-----GAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATG 364664 | |||| || |||| || ||| || |||| | |||| || || | || Sbjct 487516 TCCCTACGAATCATTCAAGGGATCACCTGCATCCGAGGGCATCCTCCAATTCGACATGTG 487575 Query 364665 GAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGC 364723 | |||||| ||| |||| || ||| | ||||| |||| | | | | | ||| ||| Sbjct 487576 GGATGTCAAGCCCTCTGACCTGTGGGAGTGGGACTCGCTCAAGGAGC-AGATCAAGGAGC 487634 Query 364724 ATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCC 364783 | ||||| |||||| | | | || || ||||| || || ||| | ||||| | Sbjct 487635 ACGGTACGCGCAACAGCTTGCTCCTCGCCCCTATGCCAACTGCCAGTACGTCCCAGATTC 487694 Query 364784 TCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTT 364843 | || ||||||||||||||||| || | || ||| | || || || || ||| Sbjct 487695 TGGGCAACAACGAGTGCTTCGAGCCCTACACTTCCAACATCTACCAGCGACGTGTCCTTG 487754 Query 364844 CCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGT 364903 |||| || || | ||| || || | || ||||||| || |||| ||| || | Sbjct 487755 CCGGCGAGTTCCAGGTTGTCAACCCCTGGCTTCTCAAGGACCTGGTCGACACCGGCCTCT 487814 Query 364904 GGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAG 364963 || || |||||||||| |||||| || | ||||| || | |||||||| || Sbjct 487815 GGTCCGATGCCATGAAGAACCGTATCATTGCTGAGAATGGCTCCATTCAGAACATCCCCA 487874 Query 364964 GATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCG---AA 365020 | || |||||| | ||| | ||||||| ||||| ||||| ||||| ||| || Sbjct 487875 ACATCCCCGAAGATATCAAGGCCCTTTACAAGACCGTCTGGGAGATTTCTCAGCGCCAAA 487934 Query 365021 CTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACG 365080 | || | |||||||| ||||| |||||||| || |||| |||||| | ||| Sbjct 487935 TTGTC---CAGATGGCGGCTGATCGTGGTGCTTTCATTGATCAGTCCCAGTCCCTGAACA 487991 Query 365081 TATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAAT 365140 | ||||| | || || | |||| |||| |||||| ||| || ||||| Sbjct 487992 TCCACATGAAGGACCCCACAATGGGCAAGATTACCAGCATGCACTTCACTGGCTGGAAGC 488051 Query 365141 CCGGTCTTAAGACAGG 365156 ||||| ||||| || Sbjct 488052 TTGGTCTCAAGACCGG 488067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350310254054