Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq141 107 4e-18 >seq141 Length=465755 Score = 107 bits (118), Expect = 4e-18 Identities = 176/254 (69%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| || || || || || |||||||| | ||| ||| | || ||| Sbjct 372293 ATCATCACTGATGCTGTCCGAATTGAGCAGGAATTCTTGACCGAGGCTCTCCCCTGCGCC 372234 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || | ||||||||||| | || ||| ||||||||||| || || |||||||| | Sbjct 372233 CTGCTCGGCATGAACTCCAACCTGATGAAGCAGTACATCGAGTTTGTTGCCGACCGTCTG 372174 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | |||| || || | ||||| | ||||| || |||||||||| ||| |||||| Sbjct 372173 CTTGTCGCTCTCGGCAACGAGAAGATCTACAAGTCTGCCAACCCCTTTGACTTCATGGAG 372114 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 |||||| ||| || || || ||||| ||||| ||||| ||| || || || Sbjct 372113 AACATTTCTCTTGGCGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAGAAG 372054 Query 243742 CCTGGTGTGATGAA 243755 ||||||| ||||| Sbjct 372053 GCTGGTGTCATGAA 372040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102877216261950