Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq141 140 4e-28 >seq141 Length=465755 Score = 140 bits (154), Expect = 4e-28 Identities = 351/525 (67%), Gaps = 15/525 (3%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || |||||||||||||||||| |||||||| || || || ||| ||| || Sbjct 372348 GGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACC 372407 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||||||||| |||||||| | |||||| || | ||| | ||| ||||||||| Sbjct 372408 AGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAAGCACCGCTGAAGAAGAT 372467 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC--- 126222 ||||| || || || |||| || |||| |||||||| || || |||| Sbjct 372468 ACCCTCGACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGA---AGAGTTCTTGTCCTG 372524 Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 126282 | |||||| || ||||| | ||||| || ||| || || | ||||| || || | Sbjct 372525 GATCCACTTGATGGCCCAGTCGGCCTTCTTGCGGATGCAAGGAATGGTCTCAATGGCGTT 372584 Query 126283 AAAGA-GTTCCTTC-TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATAT 126340 |||| || || | | ||| | || |||||||| | || ||||| || || Sbjct 372585 GAAGAGGTAGCTGCGCTGGCTGTT--CTCCTTGATGTAGGTGTCGATGAGCAGGGAGTAG 372642 Query 126341 GTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCT 126399 || ||| ||||| | | ||| || | ||| | ||||||| | || || ||| Sbjct 372643 GTCTCGGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGAGCCTCGGG 372701 Query 126400 TATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCC 126459 ||||| ||||| || || | | ||||| ||||| || || || | Sbjct 372702 GATCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCAGAGGC 372761 Query 126460 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTT 126516 ||||| || |||||||| | ||||| | || || | ||||||| || | || Sbjct 372762 GGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTT 372821 Query 126517 CCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||||||| |||||||| || ||||| | ||| || || ||||| Sbjct 372822 CCAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 372866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352129016760