Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq7 279 5e-70 >seq7 Length=2436850 Score = 279 bits (308), Expect = 5e-70 Identities = 1081/1675 (65%), Gaps = 44/1675 (3%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | |||||| ||| ||||| || |||||||| ||| | |||||| Sbjct 486284 AACTACCAATACTTCGGCTTCAAGACTTTGGAGCGATCATACCTCCTGAAGCTTGATGGC 486343 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || ||||| || || || || | ||||| || | | || || || || Sbjct 486344 AAGATTGTTGAGCGGCCACAGCACATGATTATGCGAGTGTCTGTTGGCATCTGGGGAGAC 486403 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 ||||| | ||| || | | | || |||| |||| | ||| ||| Sbjct 486404 GACATTGAGCGTGTCCTGGAGACATACAACCTCATGTCTAGCAAGTTCTTCACCCATGCC 486463 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 |||| ||||||||||| || || |||||| | | ||| |||| || || ||| || | Sbjct 486464 TCCCCCACCCTGTTCAATGCTGGTACCCCGCAGGCCCAGCTGTCCTCATGCTTCTTGGTC 486523 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| ||| ||| || || | |||| || ||| ||||| | || Sbjct 486524 GAC-ATGAAGGACGATAGCATTGAGGGTATCTATGACACTCTGAAGACATGTGCCATGAT 486582 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 || || || || || ||||| | | |||||| | | ||||||| || || || Sbjct 486583 TTCCAAGATGGCTGGTGGTATCGGCTTGAACGTCCACCGCATCCGTGCCACCGGCTCTTA 486642 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| || ||||| || ||||||||||| | | || ||||| || ||||||||||| Sbjct 486643 CATTGCTGGCACCAACGGTACCTCCAACGGTATTATTCCCATGCTTCGAGTCTTCAACAA 486702 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || | || || |||||||||||| | | | ||| | || || |||| || Sbjct 486703 CACTGCCAGATATGTCGACCAGGGTGGTAACAAGCGTCCTGGTGCCTTTGCCATCTACCT 486762 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 ||||||||||||||| ||||| | ||| | || || || |||||||||||||| || Sbjct 486763 CGAGCCCTGGCACGCCGACGTCTTTGAATTCCTTGATCTCCGCAAGAACCACGGCAAGGA 486822 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 || | || | ||| | ||| ||||||||| | || || || || ||||| || Sbjct 486823 AGAGGTCCGCGCTCGCGACTTGTTCCTTGCTCTCTGGATTCCCGATCTCTTCATGAAGCG 486882 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 || ||||| |||| | ||||| || | || ||||| ||||| || || || | || Sbjct 486883 TGTTGAGAAGAACTTGGACTGGACGCTCATGTGCCCCAACGAATGCCCTGGCCTTGCTGA 486942 Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGCCA 94432 | | ||| | || || | |||||| ||||| | |||| | || | Sbjct 486943 CTGCTATGGCGAGGAATTCGAGGCTCTGTATGAGAAGTACGAGAAGGAGGGACGTGGTC- 487001 Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492 | ||| || |||| |||||||||| || ||| |||| | ||| || || | Sbjct 487002 GCAAGACCATCCGTGCTCAGAAGCTGTGGTATTCCATCCTGGAAGCCCAGACCGAAACTG 487061 Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 ||| |||| ||| | | |||||| | |||| |||| ||||||| || |||| | Sbjct 487062 GTAACCCCTTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGG 487121 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 | ||| ||||| || || |||||||||||| ||||||| | | || || ||| Sbjct 487122 GAACCATCCGCAGCTCCAACCTCTGCACCGAGATTATCGAGTACTGTGCCCCAGATGAGG 487181 Query 94613 TTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGT 94672 ||||||| || ||| ||| ||| | ||| | ||| || ||| ||||| Sbjct 487182 TTGCTGTTTGCAACTTGGCCTCTTTGGCCCTCCCTGCTTATGT-CGA-----CTACA--A 487233 Query 94673 CTACTGCTTCGTTCGATCTGGAGGAGCT-TGTGAACTTCGCGGGAAGGATGGTCTTGAAC 94731 | | ||| | | ||| | || |||| |||| | | | || | ||| ||| Sbjct 487234 CGAAGGCTGC-TACGACTTTAAGAAGCTCCATGAAGTCACCAAGGTGG-TTGTCCGCAAC 487291 Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTG 94791 || |||| | | || || ||| |||||| |||| |||||| ||| ||| || Sbjct 487292 CTTAACAAGATCATTGATGTCAACCACTACCCTGTCCAGGAGGCCCGCAACAGCAACATG 487351 Query 94792 AAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGT 94851 || || ||||| || | || ||||||||| | || ||||| | | |||| Sbjct 487352 CGCCACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCCGACGCTTTCCTTGCCCTGCGC 487411 Query 94852 CTGCCCTACGACTCTGTCGA--CGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTT 94909 |||||| || ||| ||| | || | | |||| | | || || || | ||| | Sbjct 487412 ATGCCCTTTGAGTCTCCCGAGGCTCGTCAG--CTGAACAAGCAGATCTTTGAGACCATCT 487469 Query 94910 ATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAAT 94969 | | | |||| | | || | | | |||| || | || || |||||| Sbjct 487470 ACCATGCGGCCCTTGAGGCTTCTATGGAGATCGCCA---AGGTGGAGGGTCCCTACGAAT 487526 Query 94970 CGTTCCGCGGATCGCCCTTGGAAC--AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAA 95027 | ||| ||||| || || | | ||||||| | || |||||| | |||| ||| || Sbjct 487527 CATTCAAGGGATCACC--TGCATCCGAGGGCATCCTCCAATTCGACATGTGGGATGTCAA 487584 Query 95028 GCCCTCGGGTCTGTACGACTGGGA--AGCTCTACGCGCTGATGTTATCAAACACGGTGTG 95085 |||||| | |||| || ||||| |||| | | || || | | | |||||| | Sbjct 487585 GCCCTCTGACCTGTGGGAGTGGGACTCGCTCAAGGAGCAGA--TCAAGGAGCACGGTACG 487642 Query 95086 AAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAAC 95145 ||| |||| | ||||| ||||| || ||| ||| | ||||| || |||||| Sbjct 487643 CGCAACAGCTTGCTCCTCGCCCCTATGCCAACTGCCAGTACGTCCCAGATTCTGGGCAAC 487702 Query 95146 AACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAA 95205 ||||||| ||||| |||| ||| |||||| | ||| | | || || || ||||| || Sbjct 487703 AACGAGTGCTTCGAGCCCTACACTTCCAACATCTACCAGCGACGTGTCCTTGCCGGCGAG 487762 Query 95206 TTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGG-GTGT-GTGGGGT 95262 |||| || ||||| || || |||||| | || | | || | | || | | Sbjct 487763 TTCCAGGTTGTCAACCCCTGGCTTCTCAAGGACCTGGTCGACACCGGCCTCTGGTCCGAT 487822 Query 95263 GACAAGGTCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCA 95318 | || | ||||||| | |||| | || |||||| | ||||||||||| | Sbjct 487823 GCCA---TGAAGAACCGTATCATTGCT----GAGAATGGCTCCATTCAGAACATCCCCAA 487875 Query 95319 AATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 || || || || |||||||| || ||||||||||| |||||||| | |||||| Sbjct 487876 CATCCCCGAAGATATCAAGGCCCTTTACAAGACCGTCTGGGAGATTTCTCAGCGC 487930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721981744120