Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq21 89.7 4e-12 >seq21 Length=197681 Score = 89.7 bits (98), Expect = 4e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 671660 GAATTTTTCTTCCAAGTAATGGCAGGTCGTGAAGGTATTATTAATACGGCTATTAAAACT 671719 ||||| |||||||| | ||||| |||||||||||| | ||| |||| || | || || Sbjct 46391 GAATTCTTCTTCCACGCCATGGCTGGTCGTGAAGGTCTCATTGATACTGCCGTCAAGACA 46450 Query 671720 GCTGATACTGGTTATATTCAAAGAAAACTTGTTAAAATGCTCGAAGATATCAAACAAGAA 671779 ||||| |||||||||||||| ||| | || ||| || |||||| |||| || Sbjct 46451 GCTGAGACTGGTTATATTCAGAGACGTTTGGTCAAAGCTCTGGAAGATCTCAACGCTCAA 46510 Query 671780 TATGATGGTACAGT 671793 |||||||| || || Sbjct 46511 TATGATGGAACGGT 46524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780812624211082