Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq7 230 3e-55 seq141 113 5e-20 seq9 86.0 7e-12 >seq7 Length=2436850 Score = 230 bits (254), Expect = 3e-55 Identities = 927/1435 (65%), Gaps = 49/1435 (3%) Strand=Plus/Minus Query 105895 GTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGG 105954 |||||||| | ||||| || || ||| | || | | |||||||| | |||||||| Sbjct 487777 GTTGACAACCTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGG 487718 Query 105955 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 106014 || ||||| || || || |||| || || | || ||| |||||||| || || | Sbjct 487717 CTCGAAGCACTCGTTGTTGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAG 487658 Query 106015 CAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA 106074 | | ||||| || ||| | |||||||| | |||||||| ||||| || | Sbjct 487657 GAGCAAGCTGTTGCGCGTACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCA 487598 Query 106075 --GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGA 106132 | | || || || || | ||||||| || ||||| || | || | ||| | || Sbjct 487597 CAGGTCAGAG-GGCTTGACAT-CCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGT 487540 Query 106133 GAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCTCGCCTCCAG 106191 || |||| |||| || |||| ||| | | | || | || | || ||||| || Sbjct 487539 GATCCCTTGAATGATTCGTAGGGACCCTCCACCTTGGCGATCTCCATAGAA-GCCTCAAG 487481 Query 106192 GGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATC 106251 || || || || ||||| |||||||| | |||| || || || || || Sbjct 487480 GGCCGCATGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCTGACGAGCCTCGGGAGACTC 487421 Query 106252 AAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCA 106306 ||| |||| || |||| | || | || || ||||| || ||||| | |||| Sbjct 487420 AAAGGGCATGCGCAG-GGCA----AGGAAAGCGTCGGCAAGACCCTGGACACCAACACCA 487366 Query 106307 ATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCA 106366 || |||| ||| ||||| || || || || || || || || || ||| Sbjct 487365 ATGGGTCGGTGGCGCATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGGTTGACATCA 487306 Query 106367 ATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA 106426 |||| ||| || || | ||| | ||| |||| |||||| || || | | | || Sbjct 487305 ATGATCTTGTTAAGGTTGCGGACAACCACCTTGGTGACTTCATGGAGCTTCTTAAAGTCG 487246 Query 106427 AAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACA 106486 | || | | | |||||| || ||||| | || ||||| ||||||||| Sbjct 487245 TAGCAGCCTTCGTTGTAGTCGACATAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCAAACA 487186 Query 106487 GCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATC 106546 || |||||| | |||||| | ||| || || || | |||||| || || Sbjct 487185 GCAACCTCATCTGGGGCACAGTACTCGATAATCTCGGTGCAGAGGTTGGAGCTGCGGATG 487126 Query 106547 GTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGC 106606 || |||| ||||| ||||| ||||| |||||| |||||||||||||||||| |||| Sbjct 487125 GTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGG 487066 Query 106607 GTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAAT 106665 | || || || ||||| | | || || | | ||||| | || | | || || Sbjct 487065 TTACCAGTTTCGGTCTGGGCTTCCAGGATGGAATACCACAGCTTCTGAGCACGG----AT 487010 Query 106666 GGCGTTGG---CCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACC 106722 || ||| | ||||||||| ||||||||| || || || || || ||||| || Sbjct 487009 GGTCTTGCGACCACGTCCCTCCTTCTCGTACTTCTCATACAGAGCCTCGAATTCCTCGCC 486950 Query 106723 CACCGC-GTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCACCC 106780 | || ||| | || || || || || || || || | || | ||| | ||| Sbjct 486949 -ATAGCAGTCAGCAAGGCCAGG-GCATTCGTTGGGGCACATGAGCGTCCAGT--CCAAGT 486894 Query 106781 TC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG-ATGAAAAGAGATCTCTA 106837 || |||||| ||||||||||| || || |||||||| || | | | || || || | | Sbjct 486893 TCTTCTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAG-TCGCGA 486835 Query 106838 CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCG 106897 || ||||||| | || ||||| || | |||||||| || | || || ||| Sbjct 486834 GCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAATTCAAAGACGTCGGCG 486775 Query 106898 TGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTT 106951 ||||| ||||| || |||| || | | || ||||| ||| | || | Sbjct 486774 TGCCAGGGCTCGAGGTAGATGGCAAAGGCACCAG---GACGCTTGTTACCACCCTGGTCG 486718 Query 106952 ACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCA 107011 ||||| | || ||| ||| || || |||||||| ||||||||||| | || ||| Sbjct 486717 ACATATCTGGCAGTGTTGTTGAAGACTCGAAGCATGGGAATAATACCGTTGGAGGTACCG 486658 Query 107012 TTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCC 107071 || || || ||| ||| |||| | | |||| || || || ||||| Sbjct 486657 TTGGTGCCAGCAATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCGATACCA 486598 Query 107072 CCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAG 107131 |||||| ||| || || ||||| | | ||||| |||||||||| | || Sbjct 486597 CCAGCCATCTTGGAAATCATGGCACATGTCTTCAGAGTGTCATAGATACCCTCAATGCTA 486538 Query 107132 TCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTT-GGTGTACCAGCATT 107190 || ||||| || ||| | |||||| ||||| ||| || || || ||||||||||| Sbjct 486537 TCGTCCTTCATGTCGACCAAGAAGCATGAGGACAGCTG-GGCCTGCGGGGTACCAGCATT 486479 Query 107191 GAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCC 107248 ||| ||||| || | || || ||| | | |||| ||||| || |||||||||| Sbjct 486478 GAACAGGGTGGGGGAGGCATGGGTGA--AGAACTTGCTAGACATGAGGTTGTATGTCTCC 486421 Query 107249 AAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 | |||| |||||||| || || |||||| | | ||| ||||||| ||||| Sbjct 486420 AGGACACGCTCAATGTCGTCTCCCCAGATGCCAACAGACACTCGCATAATCATGT 486366 >seq141 Length=465755 Score = 113 bits (124), Expect = 5e-20 Identities = 347/526 (66%), Gaps = 17/526 (3%) Strand=Plus/Plus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || |||||||||||| || || || || || || || || ||| || || Sbjct 372348 GGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACC 372407 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 ||||||||||| |||||||| | ||| | || | | || | ||| ||||||||| Sbjct 372408 AGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAAGCACCGCTGAAGAAGAT 372467 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC--- 117449 |||||| || ||||| |||| ||||||| ||| ||||| ||| || |||| Sbjct 372468 ACCCTCGACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGA---AGAGTTCTTGTCCTG 372524 Query 117450 AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTC 117509 | ||| || || ||||| | |||||||| || || || | || | ||||| | Sbjct 372525 GATCCACTTGATGGCCCAGTCGGCCTTCTTGCGGATGCAAGGAATGGTCTCAATGGCGTT 372584 Query 117510 AAATAACT-GCTTC-TTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATAT 117567 || | | ||| | | | | || ||||| ||||| |||| || | || || Sbjct 372585 GAAGAGGTAGCTGCGCTGGCTGTTC--TCCTTGATGTAGGTGTCGATGAGCAGGGAGTAG 372642 Query 117568 GTTTCGCCATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCT 117626 || ||| || | | | ||| ||| | || | ||||||| | || || ||| Sbjct 372643 GTCTCGGAGTGGATGTTCTCCATCATGATCTGGA-AGCCGTAGAAGCATCGAGCCTCGGG 372701 Query 117627 TATCTGCACTTCATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACC 117685 ||||| || || |||| || | | | ||||| ||||| || || || Sbjct 372702 GATCTGGACCTC-GCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCAGAGG 372760 Query 117686 CAGCAAAGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCT 117742 | |||||||| |||||||||| ||||| | ||| || | || |||| || | | Sbjct 372761 CGGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGT 372820 Query 117743 TCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 ||||||||| ||||| ||||||| ||||| ||||| || ||||| Sbjct 372821 TCCAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 372866 >seq9 Length=1761156 Score = 86.0 bits (94), Expect = 7e-12 Identities = 132/183 (72%), Gaps = 8/183 (4%) Strand=Plus/Plus Query 9450 CCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACATTGGATGAAGGGGACATT 9508 ||||||||||||||||||||||| || | | || || || | ||| || || Sbjct 1107248 CCCACACCAACAAACATCTCCACGAATTCAGATCCGCTCACGCTGAA-GAAAGGCACGCC 1107306 Query 9509 AGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAG 9568 ||| || || ||| | || ||||||||||||||| || || ||||| || ||||| Sbjct 1107307 AGACTCTCCAGCAGTAGCCTTGGCGAGAAGAGTCTTTCCTGTTCCTGGTGGGCCGGCGAG 1107366 Query 9569 GAGGGCACCCCGTGGAATCTTGGCGCC--ACTTC-CAAAGTATCTCTCAGGTTGCTTGAG 9625 | |||||| || ||||||||||| || |||| |||| | ||||||| ||||| || Sbjct 1107367 AATGGCACCTCGAGGAATCTTGGCACCCAGCTTCTCAAACT---TCTCAGGCTGCTTTAG 1107423 Query 9626 AAA 9628 || Sbjct 1107424 GAA 1107426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979347172280