Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq7 232 8e-56 seq141 113 5e-20 >seq7 Length=2436850 Score = 232 bits (256), Expect = 8e-56 Identities = 1055/1645 (64%), Gaps = 61/1645 (4%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| ||||| | ||||| || | | |||||| || || |||||||| |||| Sbjct 486359 CCACAGCACATGATTATGCGAGTGTCTGTTGGCATCTGGGGAGACGACATTGAGCGTGTC 486418 Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 ||||||||||| || ||||| |||| | | ||| || || | || ||||| | Sbjct 486419 CTGGAGACATACAACCTCATGTCTAGCAAGTTCT--TCACCCATGCCTCCCCCACCCTGT 486476 Query 75330 TCAATGCTGGTACACC-AAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 ||||||||||||| || || || ||| ||||| |||||| | ||| || ||||| Sbjct 486477 TCAATGCTGGTACCCCGCAGGCC-CAGCTGTCCTCATGCTTCTTGGTCGACATGAAGGAC 486535 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 || || | |||||||||| ||||| | | ||||| || || ||| |||| Sbjct 486536 GATAGCATTGAGGGTATCTATGACACTCTGAAGACATGTGCCATGATTTCCAAGATGGCT 486595 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508 || ||||| || || || |||| | | |||| ||| ||| || || Sbjct 486596 GGTGGTATCGGCTTGAACGTCCACCGCATCCGTGCCACCGGCTCTTACATTGCTGGCACC 486655 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || ||| || | ||||||||||| |||||||| || || ||| ||| || | ||| Sbjct 486656 AACGGTACCTCCAACGGTATTATTCCCATGCTTCGAGTCTTCAACAACACTGCCAGATAT 486715 Query 75569 GTAAATCAAGCGGGGCGTCGCAAG------GGGTCCATCGCGGTCTACTTGGAACCATGG 75622 || | || ||| || |||| || || | || ||||| | || || ||| Sbjct 486716 GTCGACCA---GGGTGGTAACAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCCTGG 486772 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || ||||| || | || |||||||| | || ||||| || | ||||||| || Sbjct 486773 CACGCCGACGTCTTTGAATTCCTTGATCTCCGCAAGAACCACGGCAAGGAAGAGGTCCGC 486832 Query 75683 TGTAGAGATCTCTTTTCAT-CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG-- 75739 | | || || || | | | || |||||||| || || ||||||||||| |||||| Sbjct 486833 GCTCGCGA-CTTGTTCCTTGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTTGAGAA 486891 Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGAC-GCGG 75797 || ||| | ||| | || | || || || || || || || || | ||| || Sbjct 486892 GAACTTGG--ACTGGACGCTCATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACTGCTA 486948 Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGG---GTAGAGCCAATG 75854 | || ||||| || || || || || ||||| || |||||| || | ||| Sbjct 486949 T-GGCGAGGAATTCGAGGCTCTGTATGAGAAGTACGAGAAGGAGGGACGTGGTCGCAA-- 487005 Query 75855 CGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913 ||| | || | | || | | ||| | | || || || | ||||| || ||||| Sbjct 487006 -GACCAT-CCGTGCTCAGAAGCTGTGGTATTCCATCCTGGAAGCCCAGACCGAAACTGGT 487063 Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973 | || | ||||| ||||||||||| || ||| ||||| ||||| ||||| ||||| Sbjct 487064 AACCCCTTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGGGA 487123 Query 75974 ACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG 76033 || ||| ||||| || || ||||| || ||| | |||||| | |||||| Sbjct 487124 ACCATCCGCAGCTCCAACCTCTGCACCGAGATTATCGAGTACTGTGCCCCAGATGAGGTT 487183 Query 76034 GCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACT 76093 ||||||||||| ||||| || | ||||| || |||||| | | | || Sbjct 487184 GCTGTTTGCAACTTGGCCTCTTTGGCCCTCCCTGCTTATGTCGACTACAACGAAGGCTGC 487243 Query 76094 TTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTC 76153 | || | | | || || |||||| |||| ||| | ||| | || || ||| || Sbjct 487244 TACGACTTTAAGAAGCTCCATGAAGTCACCAAGGTGGTTGTCCGCAACCTTAACAAGATC 487303 Query 76154 ATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCT 76213 ||||| || || || || || || || || || ||||| ||| |||| Sbjct 487304 ATTGATGTCAACCACTACCCTGTCCAGGAGGCCCGCAACAGCAACATGCGCCACCGACCC 487363 Query 76214 ATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCA-----T 76268 |||||| | ||||| || ||||| || || | || | |||| || |||| | Sbjct 487364 ATTGGTGTTGGTGTCCAGGGTCTTGCCGACGCTTTCCT----TGCC-CTGCGCATGCCCT 487418 Query 76269 TTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 |||| || || || || |||| | |||||||| ||||| || || || Sbjct 487419 TTGAGTCTCCCGAGGCTCGTCAGCTGAACAAGCAGATCTTTGAGACCATCTACCATGCGG 487478 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 |||| ||||| | || | || | | | ||| |||| || |||| |||| | Sbjct 487479 CCCTTGAGGCTTCTATGGAGATCGCCAAGGTGGAGGGTCCCTACGAATCATTCAAGGGAT 487538 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC- 76447 | || || ||| | || | || || || || ||||||| | || || || || | | Sbjct 487539 CACCTGCATCCGAGGGCATCCTCCAATTCGACATGTGGG-ATGTCAAGCC-CTCTGACCT 487596 Query 76448 -TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 76506 | || ||||| |||||||| | ||||||||| | ||| || ||||| | | Sbjct 487597 GTGGGAGTGGGACTCGCTCAAGGAGCAGATCAAGGAGCACGGTACGCGCAACAGCTTGCT 487656 Query 76507 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 76566 | || || |||||||| ||| || | || || |||| || || || ||||| || Sbjct 487657 CCTCGCCCCTATGCCAACTGCCAGTACGTCCCAGATTCTGGGCAACAACGAGTGCTTCGA 487716 Query 76567 ACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAA 76626 || ||||| | |||||||||| | || | ||| || || ||||| ||||||| Sbjct 487717 GCCCTACACTTCCAACATCTACCAGCGACGTGTCCTTGCCGGCGAGTTCCAGGTTGTCAA 487776 Query 76627 CAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGA--- 76683 | || |||| ||||| | | || ||||||||| | | |||||| | Sbjct 487777 CCCCTGGCTTCTCAAGGACCTGGTCGACACCGGCCTCTGGTCCGATGCCATGAAGAACCG 487836 Query 76684 TCTCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCA 76742 | ||| || ||| | ||| |||||||| || ||| | | ||||| || ||||||| Sbjct 487837 TATCATTGCTGA----GAATGGCTCCATTCAGAACATCCCCAACATCCCCGAAGATATCA 487892 Query 76743 AGAATCTCTACCGCACAGTGTGGGAAAT---CAAGATGAAAGATGTCATTGACATGGCCG 76799 || || ||| || || ||||| || || || |||| | ||||| | Sbjct 487893 AGGCCCTTTACAAGACCGTCTGGGAGATTTCTCAGCGCCAAATTGTC---CAGATGGCGG 487949 Query 76800 CAGATCGTGGTCGCTTCATTGATCA 76824 | ||||||||| ||||||||||| Sbjct 487950 CTGATCGTGGTGCTTTCATTGATCA 487974 >seq141 Length=465755 Score = 113 bits (124), Expect = 5e-20 Identities = 347/526 (66%), Gaps = 17/526 (3%) Strand=Plus/Minus Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770 ||||| || ||||| ||||| ||||||| ||||| |||||||||| | || |||| Sbjct 372866 TGGACCGCCGAAGAGATTGATCTGTCCAAGGATCTGCACGACTGGAACAACCGCCTGAAC 372807 Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830 || | || ||| | ||||| |||||||||| |||||||| | || || || ||| Sbjct 372806 GATGACGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCCGCCTCTGACGGCATT 372747 Query 64831 GTTTTTGAGAATATCAATAA-CAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTC 64889 || ||||| | | | || |||| || || ||||| ||| || || | Sbjct 372746 GTCAACGAGAACCTGGTCGAGCGCTTCAGCGGC-GAGGTCCAGATCCCCGAGGCTCGATG 372688 Query 64890 ATTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAATTGA 64948 ||||||| | || | ||| ||| | | | || ||| || || || | | Sbjct 372687 CTTCTACGGCT-TCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCA 372629 Query 64949 TTGACAAATACATTAAGGATGGATCTGAAAA-GAAGC-AGTTATTTGAAGCCATCCAAAC 65006 | |||| ||||| ||||| || | | | | ||| | | || | ||||| | || Sbjct 372628 TCGACACCTACATCAAGGA--GAACAGCCAGCGCAGCTACCTCTTCAACGCCATTGAGAC 372571 Query 65007 TGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTC 65063 | || || || |||||||| | ||||| || || ||| | |||| || || Sbjct 372570 CATTCCTTGCATCCGCAAGAAGGCCGACTGGGCCATCAAGTGGATCCAGGACAAGAACTC 372511 Query 65064 TCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGG 65123 | ||||| ||| ||||||| |||| ||||| || ||||||||||||||| ||| Sbjct 372510 T---TCCTTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCAGCGG 372454 Query 65124 GTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTC 65183 | || | | || | ||| | |||||||| ||||||||||| || || ||| || Sbjct 372453 TGCTTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTC 372394 Query 65184 AAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 || || || || || || || |||||||||||| || |||||| Sbjct 372393 CAACGAGCTCATCTCTCGTGACGAGGGTCTCCACACCGACTTTGCC 372348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568130947360