Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq141 140 3e-28 >seq141 Length=465755 Score = 140 bits (154), Expect = 3e-28 Identities = 215/307 (70%), Gaps = 0/307 (0%) Strand=Plus/Minus Query 34351 ACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCG 34410 ||||||||| |||||| ||||| || ||||||| | ||| ||| ||||||| |||| Sbjct 281919 ACAAACTTGTTGATGAAGCCATCGAGGTGGTCCTGCAGCTTTGCGGCATCGTGGGCGCCG 281860 Query 34411 TTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCG 34470 |||| ||| | || |||| ||| |||| | || || || ||||||||| | || Sbjct 281859 TTGATGATCCAACGGTCGTCCTTGGGGTCGATGTTGGTCTGAGCTCCCAGCTCGAAACCA 281800 Query 34471 AAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTG 34530 |||||||| | ||| | || || |||| | || ||||| || || |||| Sbjct 281799 AAGTACTTGATGACATAAGAACCGGGGCGGGCAAGAGACTGGGCGACGCTGGACAAGTTG 281740 Query 34531 ACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATT 34590 |||| || |||||||| ||||| ||||| ||||| | ||||| || |||| ||| Sbjct 281739 ACGACAACGGTCTTGATACCGTTACCCTTGCCTTCAATCTTGGTCTGGAGGCGCTCCATC 281680 Query 34591 TTGTAGCGGTAGAACGCGTCCGCCACATTGCGGTTAACGTTCACAGTCCCCATCGTGGCT 34650 |||||||||||||| || || |||| ||| |||||| || |||| ||| | Sbjct 281679 TTGTAGCGGTAGAAGGCATCGCTGACATCGCGACGAACGTTGACGAGAGCCATGGTGACG 281620 Query 34651 GGTGTTA 34657 | ||||| Sbjct 281619 GTTGTTA 281613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840608793121