Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq131 96.9 1e-14 >seq131 Length=1298602 Score = 96.9 bits (106), Expect = 1e-14 Identities = 121/163 (74%), Gaps = 5/163 (3%) Strand=Plus/Plus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||||| |||||||| || |||||||| |||||||||||| ||||| Sbjct 812009 CTCAATCAAGTGAGCGATTGTCATACGGGACGGAATGGCGTGAGGGTTGATGATGATGTC 812068 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTT-CAGGTACAATCAAACCAA 309802 || | | || ||| |||| |||||||| |||| |||| | | | ||||| Sbjct 812069 TGGAGTGACACCTTCTCTTG---TGAAGGGCATATCCTCTTGTCGGTA-AGTGACACCAA 812124 Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 |||| ||||||||| |||| | || || |||||||| ||||| Sbjct 812125 TAGTGCCCTTTTGACCGTGACGAGAGGCGAACTTGTCTCCAAT 812167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951969473094616