Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq7 87.8 4e-12 >seq7 Length=2436850 Score = 87.8 bits (96), Expect = 4e-12 Identities = 147/212 (69%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 110686 TTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT---A 110742 || |||| ||| | ||||||||||| ||||||| | |||||| | || |||||| | Sbjct 486675 TTATTCCCATGCTTCGAGTCTTCAACAACACTGCCAGATATGTCGACCAGGGTGGTAACA 486734 Query 110743 AGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCT 110802 || | ||| | ||||| ||||| ||||| || ||||| | || | ||||||||| Sbjct 486735 AGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCCTGGCACGCCGACGTCTTTGAATTCC 486794 Query 110803 TAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAA 110862 | || || || || || || || ||||| | || || || || || ||| Sbjct 486795 TTGATCTCCGCAAGAACCACGGCAAGGAAGAGGTCCGCGCTCGCGACTTGTTCCTTGCTC 486854 Query 110863 TGTGGATTTCAGATTTATTCATGAAACGTGTT 110894 | |||||| | ||| | |||||||| |||||| Sbjct 486855 TCTGGATTCCCGATCTCTTCATGAAGCGTGTT 486886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186809804410317