Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq92 84.2 2e-11 seq77 84.2 2e-11 seq67 84.2 2e-11 seq62 84.2 2e-11 seq3 84.2 2e-11 >seq92 Length=352844 Score = 84.2 bits (92), Expect = 2e-11 Identities = 209/308 (68%), Gaps = 16/308 (5%) Strand=Plus/Plus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGG--TTCC 34379 || || ||||||||||||| | || || || || || || |||| ||| || | | Sbjct 267626 GGCGTCAAGATCTGGGACGGCAATGGCTCCCGCGAGTTCCTCGACA-GCGTCGGCCTGAC 267684 Query 34380 CATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGG 34439 | | || |||| || ||| ||||||| ||||||||||| |||||| | |||||||| | Sbjct 267685 CCAC-CGCGAGGTCGGTGACCTGGGCCCCGTCTACGGGTTTCAGTGGCGGCACTTTGGCG 267743 Query 34440 CGGAGTATCGGGGGAGCGAA-GCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTAC 34498 | ||||| || || || || || || ||| | || |||| | ||||||||| | Sbjct 267744 CCGAGTA-CGTGGACGCAAAGGCAGATTATGCTGGCAAGGGCGTCGACCAGCTGGCCGAG 267802 Query 34499 GTGATCGACA--CCTTGAAGCGGAACCCTGATGAC---AGAAGGATCGTGATGTGCGCGT 34553 | ||| ||| | | | | | |||||| | ||| |||| |||| | | |||| | Sbjct 267803 ATTATCCACAAGCTTCGCAAC--AACCCTTACGACCGGAGAATGATCCTCA---GCGCCT 267857 Query 34554 GGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCT 34613 |||||||| || || ||||| || || || ||||||| | ||| |||| Sbjct 267858 GGAACCCGCGAGACTTCAAGAGCATGGCCCTGCCGCCCTGCCACATGTTTGCCCAGTTCT 267917 Query 34614 ACGTCGCG 34621 ||||| || Sbjct 267918 ACGTCTCG 267925 Score = 84.2 bits (92), Expect = 2e-11 Identities = 209/308 (68%), Gaps = 16/308 (5%) Strand=Plus/Minus Query 6724 CGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTT 6783 || ||||||||| ||| | ||||||| || || || ||||| || || Sbjct 267925 CGAGACGTAGAACTGGGCAAACATGTGGCAGGGCGGCAGGGCCATGCTCTTGAAGTCTCG 267866 Query 6784 CGGGTTCCACGCGCACATCACGATCCTTCT---GTCATCAGGGTTCCGCTTCAAGG--TG 6838 ||||||||| |||| | | |||| |||| ||| | |||||| | | | | | || Sbjct 267865 CGGGTTCCAGGCGC---TGAGGATCATTCTCCGGTCGTAAGGGTT--GTTGCGAAGCTTG 267811 Query 6839 TCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGC-TTCGCTCCCCCG 6897 | ||| | | ||||||||| | |||| || | ||| || || || || || || Sbjct 267810 TGGATAATCTCGGCCAGCTGGTCGACGCCCTTGCCAGCATAATCTGCCTTTGCGTCCACG 267751 Query 6898 ATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTC 6957 ||||| || |||||||| | |||||| ||||||||||| ||||||| ||| || |||| Sbjct 267750 -TACTCGGCGCCAAAGTGCCGCCACTGAAACCCGTAGACGGGGCCCAGGTCACCGACCTC 267692 Query 6958 CCGAGATGGGAA--CCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATC 7015 || | || | || ||| |||| || || || || || || | ||||||||||| Sbjct 267691 GCG-GTGGGTCAGGCCGACGC-TGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATC 267634 Query 7016 TTCACCCC 7023 || || || Sbjct 267633 TTGACGCC 267626 Score = 84.2 bits (92), Expect = 2e-11 Identities = 187/274 (68%), Gaps = 15/274 (5%) Strand=Plus/Plus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| || || || | |||||||| | || | || |||||||| || || Sbjct 267997 CTGCCAGCTCTACCAGCGGTCCTGCGACATGGGCCTTGGCATCCCCTTCAACATCGCCAG 268056 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTG-GGGTTGGTTCCTGGGGAGCTGG 34754 || || ||||| || ||||| ||||||| || ||| | | || || || ||| Sbjct 268057 CTATGCGCTGCTAACACACATGCTCGCTCACGT-GTGCGACCTAGTGCC-CGGAAGC-CT 268113 Query 34755 TGCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCA 34812 | | |||| |||| || || || ||||| | |||||||||| ||| || || Sbjct 268114 TACCCACGTTATGGGAGACGCACACGTCTACATCGACCACATCGACGCTCTCAAGACACA 268173 Query 34813 GCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATTATTCG------AGCCGTCAC 34866 |||| | || ||||| || |||||||| |||| | |||| || || || || Sbjct 268174 GCTGGAGCGCGAGCCTCGGCCGTTCCCTGAGCTGGAGATTACGCGGGAGAAAGGCGGCAG 268233 Query 34867 CTCAATCGATGACTTTAGGAGCGAGGACTTCGTG 34900 | ||||||| || | | ||||||||||||| Sbjct 268234 C---ATCGATGGCTGGAAGGTCGAGGACTTCGTG 268264 Score = 84.2 bits (92), Expect = 2e-11 Identities = 187/274 (68%), Gaps = 15/274 (5%) Strand=Plus/Minus Query 6445 CACGAAGTCCTCGCTCCTAAAGTCATCGATTGAGGTGACGGCT------CGAATAATTTT 6498 ||||||||||||| | | || ||||||| | || || || || |||| | Sbjct 268264 CACGAAGTCCTCGACCTTCCAGCCATCGAT---GCTGCCGCCTTTCTCCCGCGTAATCTC 268208 Query 6499 GAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTT 6558 |||| |||||||| || ||||| || | |||||| || ||| |||||||||| Sbjct 268207 CAGCTCAGGGAACGGCCGAGGCTCGCGCTCCAGCTGTGTCTTGAGAGCGTCGATGTGGTC 268148 Query 6559 CAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCC-CAC 6615 | ||||| || || || |||| |||| | | ||| || || || | | ||| Sbjct 268147 GATGTAGACGTGTGCGTCTCCCATAACGTGGGTAAG-GCTTCCG-GGCACTAGGTCGCAC 268090 Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 || ||||||| ||||| || ||||| || || || || |||||||| || | || | Sbjct 268089 -ACGTGAGCGAGCATGTGTGTTAGCAGCGCATAGCTGGCGATGTTGAAGGGGATGCCAAG 268031 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709 |||||||| | || || || |||||||||||| Sbjct 268030 GCCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 267997 >seq77 Length=352580 Score = 84.2 bits (92), Expect = 2e-11 Identities = 187/274 (68%), Gaps = 15/274 (5%) Strand=Plus/Plus Query 6445 CACGAAGTCCTCGCTCCTAAAGTCATCGATTGAGGTGACGGCT------CGAATAATTTT 6498 ||||||||||||| | | || ||||||| | || || || || |||| | Sbjct 86204 CACGAAGTCCTCGACCTTCCAGCCATCGAT---GCTGCCGCCTTTCTCCCGCGTAATCTC 86260 Query 6499 GAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTT 6558 |||| |||||||| || ||||| || | |||||| || ||| |||||||||| Sbjct 86261 CAGCTCAGGGAACGGCCGAGGCTCGCGCTCCAGCTGTGTCTTGAGAGCGTCGATGTGGTC 86320 Query 6559 CAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCC-CAC 6615 | ||||| || || || |||| |||| | | ||| || || || | | ||| Sbjct 86321 GATGTAGACGTGTGCGTCTCCCATAACGTGGGTAAG-GCTTCCG-GGCACTAGGTCGCAC 86378 Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 || ||||||| ||||| || ||||| || || || || |||||||| || | || | Sbjct 86379 -ACGTGAGCGAGCATGTGTGTTAGCAGCGCATAGCTGGCGATGTTGAAGGGGATGCCAAG 86437 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709 |||||||| | || || || |||||||||||| Sbjct 86438 GCCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 86471 Score = 84.2 bits (92), Expect = 2e-11 Identities = 187/274 (68%), Gaps = 15/274 (5%) Strand=Plus/Minus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| || || || | |||||||| | || | || |||||||| || || Sbjct 86471 CTGCCAGCTCTACCAGCGGTCCTGCGACATGGGCCTTGGCATCCCCTTCAACATCGCCAG 86412 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTG-GGGTTGGTTCCTGGGGAGCTGG 34754 || || ||||| || ||||| ||||||| || ||| | | || || || ||| Sbjct 86411 CTATGCGCTGCTAACACACATGCTCGCTCACGT-GTGCGACCTAGTGCC-CGGAAGC-CT 86355 Query 34755 TGCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCA 34812 | | |||| |||| || || || ||||| | |||||||||| ||| || || Sbjct 86354 TACCCACGTTATGGGAGACGCACACGTCTACATCGACCACATCGACGCTCTCAAGACACA 86295 Query 34813 GCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATTATTCG------AGCCGTCAC 34866 |||| | || ||||| || |||||||| |||| | |||| || || || || Sbjct 86294 GCTGGAGCGCGAGCCTCGGCCGTTCCCTGAGCTGGAGATTACGCGGGAGAAAGGCGGCAG 86235 Query 34867 CTCAATCGATGACTTTAGGAGCGAGGACTTCGTG 34900 | ||||||| || | | ||||||||||||| Sbjct 86234 C---ATCGATGGCTGGAAGGTCGAGGACTTCGTG 86204 Score = 84.2 bits (92), Expect = 2e-11 Identities = 209/308 (68%), Gaps = 16/308 (5%) Strand=Plus/Plus Query 6724 CGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTT 6783 || ||||||||| ||| | ||||||| || || || ||||| || || Sbjct 86543 CGAGACGTAGAACTGGGCAAACATGTGGCAGGGCGGCAGGGCCATGCTCTTGAAGTCTCG 86602 Query 6784 CGGGTTCCACGCGCACATCACGATCCTTCT---GTCATCAGGGTTCCGCTTCAAGG--TG 6838 ||||||||| |||| | | |||| |||| ||| | |||||| | | | | | || Sbjct 86603 CGGGTTCCAGGCGC---TGAGGATCATTCTCCGGTCGTAAGGGTT--GTTGCGAAGCTTG 86657 Query 6839 TCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGC-TTCGCTCCCCCG 6897 | ||| | | ||||||||| | |||| || | ||| || || || || || || Sbjct 86658 TGGATAATCTCGGCCAGCTGGTCGACGCCCTTGCCAGCATAATCTGCCTTTGCGTCCACG 86717 Query 6898 ATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTC 6957 ||||| || |||||||| | |||||| ||||||||||| ||||||| ||| || |||| Sbjct 86718 -TACTCGGCGCCAAAGTGCCGCCACTGAAACCCGTAGACGGGGCCCAGGTCACCGACCTC 86776 Query 6958 CCGAGATGGGAA--CCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATC 7015 || | || | || ||| |||| || || || || || || | ||||||||||| Sbjct 86777 GCG-GTGGGTCAGGCCGACGC-TGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATC 86834 Query 7016 TTCACCCC 7023 || || || Sbjct 86835 TTGACGCC 86842 Score = 84.2 bits (92), Expect = 2e-11 Identities = 209/308 (68%), Gaps = 16/308 (5%) Strand=Plus/Minus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGG--TTCC 34379 || || ||||||||||||| | || || || || || || |||| ||| || | | Sbjct 86842 GGCGTCAAGATCTGGGACGGCAATGGCTCCCGCGAGTTCCTCGACA-GCGTCGGCCTGAC 86784 Query 34380 CATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGG 34439 | | || |||| || ||| ||||||| ||||||||||| |||||| | |||||||| | Sbjct 86783 CCAC-CGCGAGGTCGGTGACCTGGGCCCCGTCTACGGGTTTCAGTGGCGGCACTTTGGCG 86725 Query 34440 CGGAGTATCGGGGGAGCGAA-GCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTAC 34498 | ||||| || || || || || || ||| | || |||| | ||||||||| | Sbjct 86724 CCGAGTA-CGTGGACGCAAAGGCAGATTATGCTGGCAAGGGCGTCGACCAGCTGGCCGAG 86666 Query 34499 GTGATCGACA--CCTTGAAGCGGAACCCTGATGAC---AGAAGGATCGTGATGTGCGCGT 34553 | ||| ||| | | | | | |||||| | ||| |||| |||| | | |||| | Sbjct 86665 ATTATCCACAAGCTTCGCAAC--AACCCTTACGACCGGAGAATGATCCTCA---GCGCCT 86611 Query 34554 GGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCT 34613 |||||||| || || ||||| || || || ||||||| | ||| |||| Sbjct 86610 GGAACCCGCGAGACTTCAAGAGCATGGCCCTGCCGCCCTGCCACATGTTTGCCCAGTTCT 86551 Query 34614 ACGTCGCG 34621 ||||| || Sbjct 86550 ACGTCTCG 86543 >seq67 Length=351041 Score = 84.2 bits (92), Expect = 2e-11 Identities = 187/274 (68%), Gaps = 15/274 (5%) Strand=Plus/Plus Query 6445 CACGAAGTCCTCGCTCCTAAAGTCATCGATTGAGGTGACGGCT------CGAATAATTTT 6498 ||||||||||||| | | || ||||||| | || || || || |||| | Sbjct 84581 CACGAAGTCCTCGACCTTCCAGCCATCGAT---GCTGCCGCCTTTCTCCCGCGTAATCTC 84637 Query 6499 GAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTT 6558 |||| |||||||| || ||||| || | |||||| || ||| |||||||||| Sbjct 84638 CAGCTCAGGGAACGGCCGAGGCTCGCGCTCCAGCTGTGTCTTGAGAGCGTCGATGTGGTC 84697 Query 6559 CAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCC-CAC 6615 | ||||| || || || |||| |||| | | ||| || || || | | ||| Sbjct 84698 GATGTAGACGTGTGCGTCTCCCATAACGTGGGTAAG-GCTTCCG-GGCACTAGGTCGCAC 84755 Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 || ||||||| ||||| || ||||| || || || || |||||||| || | || | Sbjct 84756 -ACGTGAGCGAGCATGTGTGTTAGCAGCGCATAGCTGGCGATGTTGAAGGGGATGCCAAG 84814 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709 |||||||| | || || || |||||||||||| Sbjct 84815 GCCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 84848 Score = 84.2 bits (92), Expect = 2e-11 Identities = 187/274 (68%), Gaps = 15/274 (5%) Strand=Plus/Minus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| || || || | |||||||| | || | || |||||||| || || Sbjct 84848 CTGCCAGCTCTACCAGCGGTCCTGCGACATGGGCCTTGGCATCCCCTTCAACATCGCCAG 84789 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTG-GGGTTGGTTCCTGGGGAGCTGG 34754 || || ||||| || ||||| ||||||| || ||| | | || || || ||| Sbjct 84788 CTATGCGCTGCTAACACACATGCTCGCTCACGT-GTGCGACCTAGTGCC-CGGAAGC-CT 84732 Query 34755 TGCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCA 34812 | | |||| |||| || || || ||||| | |||||||||| ||| || || Sbjct 84731 TACCCACGTTATGGGAGACGCACACGTCTACATCGACCACATCGACGCTCTCAAGACACA 84672 Query 34813 GCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATTATTCG------AGCCGTCAC 34866 |||| | || ||||| || |||||||| |||| | |||| || || || || Sbjct 84671 GCTGGAGCGCGAGCCTCGGCCGTTCCCTGAGCTGGAGATTACGCGGGAGAAAGGCGGCAG 84612 Query 34867 CTCAATCGATGACTTTAGGAGCGAGGACTTCGTG 34900 | ||||||| || | | ||||||||||||| Sbjct 84611 C---ATCGATGGCTGGAAGGTCGAGGACTTCGTG 84581 Score = 84.2 bits (92), Expect = 2e-11 Identities = 209/308 (68%), Gaps = 16/308 (5%) Strand=Plus/Plus Query 6724 CGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTT 6783 || ||||||||| ||| | ||||||| || || || ||||| || || Sbjct 84920 CGAGACGTAGAACTGGGCAAACATGTGGCAGGGCGGCAGGGCCATGCTCTTGAAGTCTCG 84979 Query 6784 CGGGTTCCACGCGCACATCACGATCCTTCT---GTCATCAGGGTTCCGCTTCAAGG--TG 6838 ||||||||| |||| | | |||| |||| ||| | |||||| | | | | | || Sbjct 84980 CGGGTTCCAGGCGC---TGAGGATCATTCTCCGGTCGTAAGGGTT--GTTGCGAAGCTTG 85034 Query 6839 TCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGC-TTCGCTCCCCCG 6897 | ||| | | ||||||||| | |||| || | ||| || || || || || || Sbjct 85035 TGGATAATCTCGGCCAGCTGGTCGACGCCCTTGCCAGCATAATCTGCCTTTGCGTCCACG 85094 Query 6898 ATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTC 6957 ||||| || |||||||| | |||||| ||||||||||| ||||||| ||| || |||| Sbjct 85095 -TACTCGGCGCCAAAGTGCCGCCACTGAAACCCGTAGACGGGGCCCAGGTCACCGACCTC 85153 Query 6958 CCGAGATGGGAA--CCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATC 7015 || | || | || ||| |||| || || || || || || | ||||||||||| Sbjct 85154 GCG-GTGGGTCAGGCCGACGC-TGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATC 85211 Query 7016 TTCACCCC 7023 || || || Sbjct 85212 TTGACGCC 85219 Score = 84.2 bits (92), Expect = 2e-11 Identities = 209/308 (68%), Gaps = 16/308 (5%) Strand=Plus/Minus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGG--TTCC 34379 || || ||||||||||||| | || || || || || || |||| ||| || | | Sbjct 85219 GGCGTCAAGATCTGGGACGGCAATGGCTCCCGCGAGTTCCTCGACA-GCGTCGGCCTGAC 85161 Query 34380 CATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGG 34439 | | || |||| || ||| ||||||| ||||||||||| |||||| | |||||||| | Sbjct 85160 CCAC-CGCGAGGTCGGTGACCTGGGCCCCGTCTACGGGTTTCAGTGGCGGCACTTTGGCG 85102 Query 34440 CGGAGTATCGGGGGAGCGAA-GCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTAC 34498 | ||||| || || || || || || ||| | || |||| | ||||||||| | Sbjct 85101 CCGAGTA-CGTGGACGCAAAGGCAGATTATGCTGGCAAGGGCGTCGACCAGCTGGCCGAG 85043 Query 34499 GTGATCGACA--CCTTGAAGCGGAACCCTGATGAC---AGAAGGATCGTGATGTGCGCGT 34553 | ||| ||| | | | | | |||||| | ||| |||| |||| | | |||| | Sbjct 85042 ATTATCCACAAGCTTCGCAAC--AACCCTTACGACCGGAGAATGATCCTCA---GCGCCT 84988 Query 34554 GGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCT 34613 |||||||| || || ||||| || || || ||||||| | ||| |||| Sbjct 84987 GGAACCCGCGAGACTTCAAGAGCATGGCCCTGCCGCCCTGCCACATGTTTGCCCAGTTCT 84928 Query 34614 ACGTCGCG 34621 ||||| || Sbjct 84927 ACGTCTCG 84920 >seq62 Length=351717 Score = 84.2 bits (92), Expect = 2e-11 Identities = 187/274 (68%), Gaps = 15/274 (5%) Strand=Plus/Plus Query 6445 CACGAAGTCCTCGCTCCTAAAGTCATCGATTGAGGTGACGGCT------CGAATAATTTT 6498 ||||||||||||| | | || ||||||| | || || || || |||| | Sbjct 84581 CACGAAGTCCTCGACCTTCCAGCCATCGAT---GCTGCCGCCTTTCTCCCGCGTAATCTC 84637 Query 6499 GAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTT 6558 |||| |||||||| || ||||| || | |||||| || ||| |||||||||| Sbjct 84638 CAGCTCAGGGAACGGCCGAGGCTCGCGCTCCAGCTGTGTCTTGAGAGCGTCGATGTGGTC 84697 Query 6559 CAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCC-CAC 6615 | ||||| || || || |||| |||| | | ||| || || || | | ||| Sbjct 84698 GATGTAGACGTGTGCGTCTCCCATAACGTGGGTAAG-GCTTCCG-GGCACTAGGTCGCAC 84755 Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 || ||||||| ||||| || ||||| || || || || |||||||| || | || | Sbjct 84756 -ACGTGAGCGAGCATGTGTGTTAGCAGCGCATAGCTGGCGATGTTGAAGGGGATGCCAAG 84814 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709 |||||||| | || || || |||||||||||| Sbjct 84815 GCCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 84848 Score = 84.2 bits (92), Expect = 2e-11 Identities = 187/274 (68%), Gaps = 15/274 (5%) Strand=Plus/Minus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| || || || | |||||||| | || | || |||||||| || || Sbjct 84848 CTGCCAGCTCTACCAGCGGTCCTGCGACATGGGCCTTGGCATCCCCTTCAACATCGCCAG 84789 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTG-GGGTTGGTTCCTGGGGAGCTGG 34754 || || ||||| || ||||| ||||||| || ||| | | || || || ||| Sbjct 84788 CTATGCGCTGCTAACACACATGCTCGCTCACGT-GTGCGACCTAGTGCC-CGGAAGC-CT 84732 Query 34755 TGCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCA 34812 | | |||| |||| || || || ||||| | |||||||||| ||| || || Sbjct 84731 TACCCACGTTATGGGAGACGCACACGTCTACATCGACCACATCGACGCTCTCAAGACACA 84672 Query 34813 GCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATTATTCG------AGCCGTCAC 34866 |||| | || ||||| || |||||||| |||| | |||| || || || || Sbjct 84671 GCTGGAGCGCGAGCCTCGGCCGTTCCCTGAGCTGGAGATTACGCGGGAGAAAGGCGGCAG 84612 Query 34867 CTCAATCGATGACTTTAGGAGCGAGGACTTCGTG 34900 | ||||||| || | | ||||||||||||| Sbjct 84611 C---ATCGATGGCTGGAAGGTCGAGGACTTCGTG 84581 Score = 84.2 bits (92), Expect = 2e-11 Identities = 209/308 (68%), Gaps = 16/308 (5%) Strand=Plus/Plus Query 6724 CGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTT 6783 || ||||||||| ||| | ||||||| || || || ||||| || || Sbjct 84920 CGAGACGTAGAACTGGGCAAACATGTGGCAGGGCGGCAGGGCCATGCTCTTGAAGTCTCG 84979 Query 6784 CGGGTTCCACGCGCACATCACGATCCTTCT---GTCATCAGGGTTCCGCTTCAAGG--TG 6838 ||||||||| |||| | | |||| |||| ||| | |||||| | | | | | || Sbjct 84980 CGGGTTCCAGGCGC---TGAGGATCATTCTCCGGTCGTAAGGGTT--GTTGCGAAGCTTG 85034 Query 6839 TCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGC-TTCGCTCCCCCG 6897 | ||| | | ||||||||| | |||| || | ||| || || || || || || Sbjct 85035 TGGATAATCTCGGCCAGCTGGTCGACGCCCTTGCCAGCATAATCTGCCTTTGCGTCCACG 85094 Query 6898 ATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTC 6957 ||||| || |||||||| | |||||| ||||||||||| ||||||| ||| || |||| Sbjct 85095 -TACTCGGCGCCAAAGTGCCGCCACTGAAACCCGTAGACGGGGCCCAGGTCACCGACCTC 85153 Query 6958 CCGAGATGGGAA--CCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATC 7015 || | || | || ||| |||| || || || || || || | ||||||||||| Sbjct 85154 GCG-GTGGGTCAGGCCGACGC-TGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATC 85211 Query 7016 TTCACCCC 7023 || || || Sbjct 85212 TTGACGCC 85219 Score = 84.2 bits (92), Expect = 2e-11 Identities = 209/308 (68%), Gaps = 16/308 (5%) Strand=Plus/Minus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGG--TTCC 34379 || || ||||||||||||| | || || || || || || |||| ||| || | | Sbjct 85219 GGCGTCAAGATCTGGGACGGCAATGGCTCCCGCGAGTTCCTCGACA-GCGTCGGCCTGAC 85161 Query 34380 CATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGG 34439 | | || |||| || ||| ||||||| ||||||||||| |||||| | |||||||| | Sbjct 85160 CCAC-CGCGAGGTCGGTGACCTGGGCCCCGTCTACGGGTTTCAGTGGCGGCACTTTGGCG 85102 Query 34440 CGGAGTATCGGGGGAGCGAA-GCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTAC 34498 | ||||| || || || || || || ||| | || |||| | ||||||||| | Sbjct 85101 CCGAGTA-CGTGGACGCAAAGGCAGATTATGCTGGCAAGGGCGTCGACCAGCTGGCCGAG 85043 Query 34499 GTGATCGACA--CCTTGAAGCGGAACCCTGATGAC---AGAAGGATCGTGATGTGCGCGT 34553 | ||| ||| | | | | | |||||| | ||| |||| |||| | | |||| | Sbjct 85042 ATTATCCACAAGCTTCGCAAC--AACCCTTACGACCGGAGAATGATCCTCA---GCGCCT 84988 Query 34554 GGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCT 34613 |||||||| || || ||||| || || || ||||||| | ||| |||| Sbjct 84987 GGAACCCGCGAGACTTCAAGAGCATGGCCCTGCCGCCCTGCCACATGTTTGCCCAGTTCT 84928 Query 34614 ACGTCGCG 34621 ||||| || Sbjct 84927 ACGTCTCG 84920 >seq3 Length=1872122 Score = 84.2 bits (92), Expect = 2e-11 Identities = 187/274 (68%), Gaps = 15/274 (5%) Strand=Plus/Plus Query 6445 CACGAAGTCCTCGCTCCTAAAGTCATCGATTGAGGTGACGGCT------CGAATAATTTT 6498 ||||||||||||| | | || ||||||| | || || || || |||| | Sbjct 1605746 CACGAAGTCCTCGACCTTCCAGCCATCGAT---GCTGCCGCCTTTCTCCCGCGTAATCTC 1605802 Query 6499 GAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTT 6558 |||| |||||||| || ||||| || | |||||| || ||| |||||||||| Sbjct 1605803 CAGCTCAGGGAACGGCCGAGGCTCGCGCTCCAGCTGTGTCTTGAGAGCGTCGATGTGGTC 1605862 Query 6559 CAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCC-CAC 6615 | ||||| || || || |||| |||| | | ||| || || || | | ||| Sbjct 1605863 GATGTAGACGTGTGCGTCTCCCATAACGTGGGTAAG-GCTTCCG-GGCACTAGGTCGCAC 1605920 Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 || ||||||| ||||| || ||||| || || || || |||||||| || | || | Sbjct 1605921 -ACGTGAGCGAGCATGTGTGTTAGCAGCGCATAGCTGGCGATGTTGAAGGGGATGCCAAG 1605979 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709 |||||||| | || || || |||||||||||| Sbjct 1605980 GCCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 1606013 Score = 84.2 bits (92), Expect = 2e-11 Identities = 187/274 (68%), Gaps = 15/274 (5%) Strand=Plus/Minus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| || || || | |||||||| | || | || |||||||| || || Sbjct 1606013 CTGCCAGCTCTACCAGCGGTCCTGCGACATGGGCCTTGGCATCCCCTTCAACATCGCCAG 1605954 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTG-GGGTTGGTTCCTGGGGAGCTGG 34754 || || ||||| || ||||| ||||||| || ||| | | || || || ||| Sbjct 1605953 CTATGCGCTGCTAACACACATGCTCGCTCACGT-GTGCGACCTAGTGCC-CGGAAGC-CT 1605897 Query 34755 TGCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCA 34812 | | |||| |||| || || || ||||| | |||||||||| ||| || || Sbjct 1605896 TACCCACGTTATGGGAGACGCACACGTCTACATCGACCACATCGACGCTCTCAAGACACA 1605837 Query 34813 GCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATTATTCG------AGCCGTCAC 34866 |||| | || ||||| || |||||||| |||| | |||| || || || || Sbjct 1605836 GCTGGAGCGCGAGCCTCGGCCGTTCCCTGAGCTGGAGATTACGCGGGAGAAAGGCGGCAG 1605777 Query 34867 CTCAATCGATGACTTTAGGAGCGAGGACTTCGTG 34900 | ||||||| || | | ||||||||||||| Sbjct 1605776 C---ATCGATGGCTGGAAGGTCGAGGACTTCGTG 1605746 Score = 84.2 bits (92), Expect = 2e-11 Identities = 209/308 (68%), Gaps = 16/308 (5%) Strand=Plus/Plus Query 6724 CGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTT 6783 || ||||||||| ||| | ||||||| || || || ||||| || || Sbjct 1606085 CGAGACGTAGAACTGGGCAAACATGTGGCAGGGCGGCAGGGCCATGCTCTTGAAGTCTCG 1606144 Query 6784 CGGGTTCCACGCGCACATCACGATCCTTCT---GTCATCAGGGTTCCGCTTCAAGG--TG 6838 ||||||||| |||| | | |||| |||| ||| | |||||| | | | | | || Sbjct 1606145 CGGGTTCCAGGCGC---TGAGGATCATTCTCCGGTCGTAAGGGTT--GTTGCGAAGCTTG 1606199 Query 6839 TCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGC-TTCGCTCCCCCG 6897 | ||| | | ||||||||| | |||| || | ||| || || || || || || Sbjct 1606200 TGGATAATCTCGGCCAGCTGGTCGACGCCCTTGCCAGCATAATCTGCCTTTGCGTCCACG 1606259 Query 6898 ATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTC 6957 ||||| || |||||||| | |||||| ||||||||||| ||||||| ||| || |||| Sbjct 1606260 -TACTCGGCGCCAAAGTGCCGCCACTGAAACCCGTAGACGGGGCCCAGGTCACCGACCTC 1606318 Query 6958 CCGAGATGGGAA--CCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATC 7015 || | || | || ||| |||| || || || || || || | ||||||||||| Sbjct 1606319 GCG-GTGGGTCAGGCCGACGC-TGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATC 1606376 Query 7016 TTCACCCC 7023 || || || Sbjct 1606377 TTGACGCC 1606384 Score = 84.2 bits (92), Expect = 2e-11 Identities = 209/308 (68%), Gaps = 16/308 (5%) Strand=Plus/Minus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGG--TTCC 34379 || || ||||||||||||| | || || || || || || |||| ||| || | | Sbjct 1606384 GGCGTCAAGATCTGGGACGGCAATGGCTCCCGCGAGTTCCTCGACA-GCGTCGGCCTGAC 1606326 Query 34380 CATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGG 34439 | | || |||| || ||| ||||||| ||||||||||| |||||| | |||||||| | Sbjct 1606325 CCAC-CGCGAGGTCGGTGACCTGGGCCCCGTCTACGGGTTTCAGTGGCGGCACTTTGGCG 1606267 Query 34440 CGGAGTATCGGGGGAGCGAA-GCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTAC 34498 | ||||| || || || || || || ||| | || |||| | ||||||||| | Sbjct 1606266 CCGAGTA-CGTGGACGCAAAGGCAGATTATGCTGGCAAGGGCGTCGACCAGCTGGCCGAG 1606208 Query 34499 GTGATCGACA--CCTTGAAGCGGAACCCTGATGAC---AGAAGGATCGTGATGTGCGCGT 34553 | ||| ||| | | | | | |||||| | ||| |||| |||| | | |||| | Sbjct 1606207 ATTATCCACAAGCTTCGCAAC--AACCCTTACGACCGGAGAATGATCCTCA---GCGCCT 1606153 Query 34554 GGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCT 34613 |||||||| || || ||||| || || || ||||||| | ||| |||| Sbjct 1606152 GGAACCCGCGAGACTTCAAGAGCATGGCCCTGCCGCCCTGCCACATGTTTGCCCAGTTCT 1606093 Query 34614 ACGTCGCG 34621 ||||| || Sbjct 1606092 ACGTCTCG 1606085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261296153840