Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq7 141 1e-28 >seq7 Length=2436850 Score = 141 bits (156), Expect = 1e-28 Identities = 439/676 (65%), Gaps = 10/676 (1%) Strand=Plus/Minus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTC-ACCATCTTCCTTAACTCGTTTCAT 78013 ||||||||||| || |||||||| | | |||||| | ||||| | ||| || ||||| Sbjct 486933 CCAGGGCATTCGTTGGGGCACATGAGCGTCCAGTCCAAGTTCTTC-TCAACACGCTTCAT 486875 Query 78014 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCC 78073 |||||||| || ||||| ||||||| || | || || | | ||||| || || Sbjct 486874 GAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCGCGAGCGCGGACCTCTTCCTTGCC 486815 Query 78074 TGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 78133 ||||| ||||| || || || | | || | ||||| || || || || || Sbjct 486814 GTGGTTCTTGCGGAGATCAAGGAATTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGAT 486755 Query 78134 TGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATA 78193 || | | ||||| || || ||||| ||||| || | ||||||||| ||||| || | Sbjct 486754 GGCAAAGGCACCAGGACGCTTGTTACCACCCTGGTCGACATATCTGGCAGTGTTGTTGAA 486695 Query 78194 AACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCC 78253 |||| | ||| |||||||||||||| || || || || || |||| ||| ||| || Sbjct 486694 GACTCGAAGCATGGGAATAATACCGTTGGAGGTACCGTTGGTGCCAGCAATGTAAGAGCC 486635 Query 78254 ACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGC 78313 | || || || | | | || || || || |||||||| || || | || Sbjct 486634 GGTGGCACGGATGCGGTGGACGTTCAAGCCGATACCACCAGCCATCTTGGAAATCATGGC 486575 Query 78314 GCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAA 78373 || |||| || || ||||||||||| || || || ||| |||||| | | || Sbjct 486574 ACATGTCTTCAGAGTGTCATAGATACCCTCAATGCTATCGTCCTTCATGTCGACCAAGAA 486515 Query 78374 ACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGT 78433 || |||| || || || || ||||| || | || || || ||||| || Sbjct 486514 GCATGAGGACAGCTGGGCCTGCGGGGTACCAGCATTGAACAGGGTGGGGGAGGCATGGGT 486455 Query 78434 AAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC----CCATT 78489 || | || ||| | || |||||||| || | | || ||||| || Sbjct 486454 GAAGAACTTGCTAGACATGAGGTTGTATGTCTCCAGGACACGCTCAATGTCGTCTCCCCA 486395 Query 78490 GATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTAT 78549 |||| || || | || ||||| | ||| ||||| || | ||||| |||| || Sbjct 486394 GATG----CCAACAGACACTCGCATAATCATGTGCTGTGGCCGCTCAACAATCTTGCCAT 486339 Query 78550 TTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 78609 | |||| | ||||||| |||||||| || || || || || | ||| |||| Sbjct 486338 CAAGCTTCAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGT 486279 Query 78610 CTCTCTCGTAAATAAT 78625 ||| ||||| | ||| Sbjct 486278 CTCGATCGTAGACAAT 486263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667089378080