Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq7 165 1e-35 >seq7 Length=2436850 Score = 165 bits (182), Expect = 1e-35 Identities = 444/676 (66%), Gaps = 10/676 (1%) Strand=Plus/Minus Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTC-ACCATCTTCCTTAACCCGTTTCAT 76608 ||||| ||||| || || ||||| | | ||| || | ||||| | ||| || ||||| Sbjct 486933 CCAGGGCATTCGTTGGGGCACATGAGCGTCCAGTCCAAGTTCTTC-TCAACACGCTTCAT 486875 Query 76609 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC 76668 |||||||| || ||||| ||||||| || | || || | | ||||| || || Sbjct 486874 GAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCGCGAGCGCGGACCTCTTCCTTGCC 486815 Query 76669 TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 76728 ||||| ||||| ||||| || | | || | ||||| || || || || || Sbjct 486814 GTGGTTCTTGCGGAGATCAAGGAATTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGAT 486755 Query 76729 CGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATA 76788 || | |||| || || || ||||| ||||| || | ||||||||||||||| || | Sbjct 486754 GGCAAAGGCACCAGGACGCTTGTTACCACCCTGGTCGACATATCTGGCAGTGTTGTTGAA 486695 Query 76789 AACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCC 76848 |||| | ||| |||||||| ||||| || ||||| || || |||| ||| ||| || Sbjct 486694 GACTCGAAGCATGGGAATAATACCGTTGGAGGTACCGTTGGTGCCAGCAATGTAAGAGCC 486635 Query 76849 ACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGC 76908 ||||| || | | ||| || || || ||||| || || || | || Sbjct 486634 GGTGGCACGGATGCGGTGGACGTTCAAGCCGATACCACCAGCCATCTTGGAAATCATGGC 486575 Query 76909 ACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAA 76968 ||| |||| ||||||||||| ||||| || ||||| ||| |||||| | | || Sbjct 486574 ACATGTCTTCAGAGTGTCATAGATACCCTCAATGCTATCGTCCTTCATGTCGACCAAGAA 486515 Query 76969 ACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGT 77028 || |||| || || || || ||||| |||| || || || ||||| || Sbjct 486514 GCATGAGGACAGCTGGGCCTGCGGGGTACCAGCATTGAACAGGGTGGGGGAGGCATGGGT 486455 Query 77029 GAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC----CCATT 77084 ||| | || ||| | || |||||||| || | || || || || || Sbjct 486454 GAAGAACTTGCTAGACATGAGGTTGTATGTCTCCAGGACACGCTCAATGTCGTCTCCCCA 486395 Query 77085 GATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTAT 77144 |||| || |||| || ||||| | ||| ||||| || || || ||| |||| || Sbjct 486394 GATG----CCAACAGACACTCGCATAATCATGTGCTGTGGCCGCTCAACAATCTTGCCAT 486339 Query 77145 TTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 77204 | |||| | ||||||| |||||||| || || || || || | ||| |||| Sbjct 486338 CAAGCTTCAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGT 486279 Query 77205 CTCTTTCGTAAATAAT 77220 ||| ||||| | ||| Sbjct 486278 CTCGATCGTAGACAAT 486263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712932644399040