Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq2158 134 3e-26
>seq2158
Length=8959
Score = 134 bits (148), Expect = 3e-26
Identities = 181/252 (72%), Gaps = 0/252 (0%)
Strand=Plus/Minus
Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445
||||| || |||||||| | ||| |||||||| | ||| || | || ||| |
Sbjct 2067 ATCATCACTGAAGCAGTCACCATCGAGCAGGAGTTCCTGACTGATGCCCTCCCCTGTGCC 2008
Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505
||| | |||||||| ||| | || ||| | |||||||| || ||||| ||||| | ||
Sbjct 2007 CTTCTCGGCATGAATGCTAAGCTCATGTGTCAGTACATTGAGTTCGTCGCCGATAGGCTT 1948
Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565
| ||||| |||||| | |||| | |||||| | | |||||||| | ||||||||
Sbjct 1947 CTCGTTGCTCTTGGTAATAAGAAGTTCTACAACACAACCAACCCCTTCGACTTTATGGAC 1888
Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625
|| || ||| || ||||||||||||||||| |||||||| | || || ||||
Sbjct 1887 AATATCTCCCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGAGATTACCAGAAA 1828
Query 230626 CCTGGTGTGATG 230637
||||||| |||
Sbjct 1827 GCTGGTGTCATG 1816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057779477179550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |