Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2158 134 3e-26 >seq2158 Length=8959 Score = 134 bits (148), Expect = 3e-26 Identities = 181/252 (72%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 ||||| || |||||||| | ||| |||||||| | ||| || | || ||| | Sbjct 2067 ATCATCACTGAAGCAGTCACCATCGAGCAGGAGTTCCTGACTGATGCCCTCCCCTGTGCC 2008 Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 ||| | |||||||| ||| | || ||| | |||||||| || ||||| ||||| | || Sbjct 2007 CTTCTCGGCATGAATGCTAAGCTCATGTGTCAGTACATTGAGTTCGTCGCCGATAGGCTT 1948 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | ||||| |||||| | |||| | |||||| | | |||||||| | |||||||| Sbjct 1947 CTCGTTGCTCTTGGTAATAAGAAGTTCTACAACACAACCAACCCCTTCGACTTTATGGAC 1888 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 || || ||| || ||||||||||||||||| |||||||| | || || |||| Sbjct 1887 AATATCTCCCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGAGATTACCAGAAA 1828 Query 230626 CCTGGTGTGATG 230637 ||||||| ||| Sbjct 1827 GCTGGTGTCATG 1816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057779477179550