Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1409 118 1e-21 >seq1409 Length=7126 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||||| || | ||| | || || || ||||||||||| || ||| Sbjct 467 GCCTCCACGCAGACGCAGGACAAGGTGGAGAGTTGATTCCTTTTGAATGTTGTAGTCGGA 408 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || || || ||| ||||||||||| ||||| |||| ||||||||||| || || || Sbjct 407 CAGCGTCCTGCCGTCCTCGAGCTGTTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGCGG 348 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 |||||||||||||| ||| || || | | || | |||||| ||| || || Sbjct 347 GATGCCTTCTTTGTCCTGGATCTTGGTCTTCACGTTGTCGATGGTGTCGCTGGATTCGAC 288 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGA 139754 ||||| || | ||||||||||||| ||||| |||| Sbjct 287 CTCAAGAGTGATGGTCTTGCCGGTCAGAGTTTTCACGA 250 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 |||||||| || |||| || || || | ||| ||| || || ||||| ||||| | Sbjct 694 CCGCCTCGCAACCGCAGGACCAAATGCAACGTGCTCTCCTTCTGGATGTTGTAATCAGAC 635 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||| ||||||||||| || ||| |||| ||||| ||||| || || || Sbjct 634 AGCGTCCGGCCGTCCTCGAGCTGTTTTCCTGCAAAGATGAGACGCTGCTGGTCTGGTGGG 575 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||| ||||| ||| ||| || | | || | |||||| ||| || ||| Sbjct 574 ATACCTTCCTTGTCCTGGATCTTTGTCTTGACGTTGTCTATCGTGTCGCTGGATTCTACC 515 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | || ||||| || | || || ||||| || ||||| Sbjct 514 TCCAGCGTGATGGTTTTGCCCGTAAGTGTCTTGACGAAGATCTGCAT 468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496043630372000