Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1409 95.1 1e-14 seq2158 86.0 6e-12 >seq1409 Length=7126 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26781 GTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAG 26840 || ||||| | || || || | ||||| | || | ||||| | |||||||||||| Sbjct 252 GTGAAAACTCTGACCGGCAAGACCATCACTCTTGAGGTCGAATCCAGCGACACCATCGAC 311 Query 26841 CAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATT 26900 | || || ||||| ||||||||||| || || || || || ||| | ||||| Sbjct 312 AACGTGAAGACCAAGATCCAGGACAAAGAAGGCATCCCGCCAGACCAGCAACGTCTCATC 371 Query 26901 TACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAA 26960 | || || ||||| ||||| || | || | | |||||| ||||||||||| ||| Sbjct 372 TTCGCTGGAAAACAGCTCGAGGACGGCAGGACGCTGTCCGACTACAACATTCAAAAGGAA 431 Query 26961 TCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||| |||| || |||||| | || | ||||| Sbjct 432 TCAACTCTCCACCTTGTCCTGCGTCTGCGTGGAGG 466 >seq2158 Length=8959 Score = 86.0 bits (94), Expect = 6e-12 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 120325 GCTCGATGATGTTAGTGTTCACGATGACGTCGGCGGCAGCGAAAAACGCGAGAACGTGCT 120384 |||| | || ||| ||| |||||| | |||| ||| ||||| || || | || || Sbjct 2556 GCTCAAGGAGGTTCTCGTTAACGATGCCATCGGAGGCGGCGAAGAAAGCCAAGACATGGG 2615 Query 120385 TAAGAAAAAATCGTTCTTTATCGTTCAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGACA 120444 | || |||||||| | || || || | |||||||| |||| || |||||||| | Sbjct 2616 AGATGAAGAATCGTTCATCGTCATTGAGCCTGTTGTTCCAGTCGTGAATATCCTTGGAGA 2675 Query 120445 TGTCGATCTCTTCGACTTTCCAGTGACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501 |||||||||||| | ||||| | || | | || ||||||||| |||||||| Sbjct 2676 GATCGATCTCTTCGGCAGTCCAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCCAGA 2732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478642744925200