Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq1409 93.3 3e-14
>seq1409
Length=7126
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| ||||| | || ||| |||| ||||| |||| |||||| || |||||||| || | |
Sbjct 694 CCGCCTCGCAACCGCAGGACCAAATGCAACGTGCTCTCCTTCTGGATGTTGTAATCAGAC 635
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | ||||||| | ||||| || ||| | || || ||||| ||||| ||
Sbjct 634 AGCGTCCGGCCGTCCTCGAGCTGTTTTCCTGCAAAGATGAGACGCTGCTGGTCTGGTGGG 575
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| || || ||||| || |||| ||| || | | | | ||||||| || ||
Sbjct 574 ATACCTTCCTTGTCCTGGATCTTTGT--CTTGACGTTGTCTATCGTGTCGCTGGATTCTA 517
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||||||||||| || || || || ||||| || ||||||||
Sbjct 516 CCTCCAGCGTGATGGTTTTGCCCGTAAGTGTCTTGACGAAGATCTGCAT 468
Score = 89.7 bits (98), Expect = 4e-13
Identities = 151/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || || | ||| || | || || || || |||||||| ||||||||||||| |
Sbjct 466 CCTCCACGCAGACGCAGGACAAGGTGGAGAGTTGATTCCTTTTGAATGTTGTAGTCGGAC 407
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || || ||||||| | ||||| || || | || || || || ||||| ||
Sbjct 406 AGCGTCCTGCCGTCCTCGAGCTGTTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGCGGG 347
Query 16829 ACGCCCTCTTTGT-CGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887
| ||| ||||||| | | | ||| | |||||| | | | | ||||||| || ||
Sbjct 346 ATGCCTTCTTTGTCCTGGATCTTGGT-CTTCACGTTGTCGATGGTGTCGCTGGATTCGAC 288
Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGAC 16923
|| | |||||||| || |||||||| ||||| ||
Sbjct 287 CTCAAGAGTGATGGTCTTGCCGGTCAGAGTTTTCAC 252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405071781922150
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |