Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq1409 114 1e-20
>seq1409
Length=7126
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | || || ||||| |||| || || || ||| ||| |
Sbjct 468 ATGCAGATCTTCGTCAAGACACTTACGGGCAAAACCATCACGCTGGAGGTAGAATCCAGC 527
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| ||| || || |||||||| ||||| ||||| || ||
Sbjct 528 GACACGATAGACAACGTCAAGACAAAGATCCAGGACAAGGAAGGTATCCCACCAGACCAG 587
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||| || |||||| | ||||| ||| || | || |||||||||
Sbjct 588 CAGCGTCTCATCTTTGCAGGAAAACAGCTCGAGGACGGCCGGACGCTGTCTGATTACAAC 647
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || ||| | ||||| || |||| ||||| || |||
Sbjct 648 ATCCAGAAGGAGAGCACGTTGCATTTGGTCCTGCGGTTGCGAGGCGGT 695
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290
|| |||||| | ||||| || || |||||||||| || ||| ||| ||| ||| | |||
Sbjct 252 GTGAAAACTCTGACCGGCAAGACCATCACTCTTGAGGTCGAATCCAGCGACACCATCGAC 311
Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350
| | || || || || ||||| || || || || || || || |||||||| ||
Sbjct 312 AACGTGAAGACCAAGATCCAGGACAAAGAAGGCATCCCGCCAGACCAGCAACGTCTCATC 371
Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410
|| || || |||||| | ||||| | | || | ||||| |||||||||||||| |||
Sbjct 372 TTCGCTGGAAAACAGCTCGAGGACGGCAGGACGCTGTCCGACTACAACATTCAAAAGGAA 431
Query 22411 TCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || | || | || |||| |||| |||||
Sbjct 432 TCAACTCTCCACCTTGTCCTGCGTCTGCGTGGAGG 466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419711195796025
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |