Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1409 167 4e-36 >seq1409 Length=7126 Score = 167 bits (184), Expect = 4e-36 Identities = 179/234 (76%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288 || || || || || | |||| ||||| || | |||| ||| || |||||||| ||| Sbjct 700 TAGTTACCGCCTCGCAACCGCAGGACCAAATGCAACGTGCTCTCCTTCTGGATGTTGTAA 641 Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348 || || || |||| || || || | ||| || || || || ||||| | || ||||| Sbjct 640 TCAGACAGCGTCCGGCCGTCCTCGAGCTGTTTTCCTGCAAAGATGAGACGCTGCTGGTCT 581 Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-A 68407 ||||| || ||||||||||| || ||||||| ||||||| || || ||||| |||| | Sbjct 580 GGTGGGATACCTTCCTTGTCCTGGATCTTTGTCTTGACGTTGTCTATCGTGTC-GCTGGA 522 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||| |||| ||||||||||| ||||| || ||||||||||| |||||||| Sbjct 521 TTCTACCTCCAGCGTGATGGTTTTGCCCGTAAGTGTCTTGACGAAGATCTGCAT 468 Score = 138 bits (152), Expect = 2e-27 Identities = 163/218 (75%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || |||| || | ||| || || || || ||||| ||||| || ||||| Sbjct 466 CCTCCACGCAGACGCAGGACAAGGTGGAGAGTTGATTCCTTTTGAATGTTGTAGTCGGAC 407 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || ||||| || || || | ||| || || ||||| ||||| | ||| ||||| || || Sbjct 406 AGCGTCCTGCCGTCCTCGAGCTGTTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGCGGG 347 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 |||||||| ||||| || ||||| | ||| ||| ||||||||||| ||| ||||| || Sbjct 346 ATGCCTTCTTTGTCCTGGATCTTGGTCTTCACGTTGTCGATGGTGTC-GCTGGATTCGAC 288 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | |||||||| || || || || || || |||| Sbjct 287 CTCAAGAGTGATGGTCTTGCCGGTCAGAGTTTTCACGA 250 Score = 118 bits (130), Expect = 2e-21 Identities = 130/172 (76%), Gaps = 1/172 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || |||||||| || ||||||||||| ||||| Sbjct 171 CCACCACGGAGACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGAC 112 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || |||| || || || | || || || ||||| || || | || ||||| ||||| Sbjct 111 AGCGTCCGGCCGTCCTCGAGTTGTTTTCCTGCGAAGATCAGGCGCTGCTGGTCTGGTGGG 52 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 ||||| ||||||||||| ||||| | ||||||| ||||||||||| |||| Sbjct 51 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATGGTGTC-GCTG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921584555880200