Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_009603.1 Length=46365 Score E Sequences producing significant alignments: (Bits) Value seq2189 120 9e-23 >seq2189 Length=383 Score = 120 bits (132), Expect = 9e-23 Identities = 188/269 (70%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 41496 CCGAGGGTATGCGGCGCGAGACGTCGTCGATGAGGCCGAGCACGCCCACGAGAGGAGTGG 41555 |||| || ||||| || ||||| || || | |||||||| || ||||| ||||| | Sbjct 103 CCGACGGGATGCGACGATGCACGTCATCAATAACACCGAGCACACCAACGAGCGGAGTAG 162 Query 41556 GGTGGATCGGCACGTCGCCGGTCTGGTTGTAGAACGAGACGTTCCCGCCCGTGACCGGGG 41615 | | |||| | | || || || |||||| | || ||||| |||||||| ||||| Sbjct 163 GCCGAATCGACTCATCTCCAGTGCGGTTGTGCAGGGAAACGTTACCGCCCGTAACCGGCA 222 Query 41616 TGCCCAGGGCGTAGCAGCCGTCGGCGAGCCCGTCCACCGTCTGACCGAACTGCCACATGA 41675 ||| || || ||||||||| | || || | |||| |||| |||||||||| Sbjct 223 CGCCAAGCTCGCGGCAGCCGTCAACCAGACCAAGGATGGTCTCGTCGAATTGCCACATGA 282 Query 41676 CCTCGGGATTCTCCGGGGAGCCGAAGTTCAGGCAGTCGGTGACCGCAGTGGGCACGGCGC 41735 | ||||||| | ||||||||| | || ||||| || ||||| || || |||| Sbjct 283 CATCGGGATCGTACGGGGAGCCATAATTGAGGCAATCAGTGACAGCCACCGGAGTTGCGC 342 Query 41736 CGGTGACCGCGACGTTGCGGTAGGCCTCG 41764 | | ||| || || || ||||| |||||| Sbjct 343 CAGAGACAGCCACATTCCGGTAAGCCTCG 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148240617000590