Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq2158 113 1e-19 >seq2158 Length=8959 Score = 113 bits (124), Expect = 1e-19 Identities = 176/252 (70%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| |||||||| | ||| |||| ||| | || || | || || Sbjct 2067 ATCATCACTGAAGCAGTCACCATCGAGCAGGAGTTCCTGACTGATGCCCTCCCCTGTGCC 2008 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 ||| | |||||||| || | |||||| | |||||||| || ||||| ||||| | || Sbjct 2007 CTTCTCGGCATGAATGCTAAGCTCATGTGTCAGTACATTGAGTTCGTCGCCGATAGGCTT 1948 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || | || |||||| || |||| | |||||| | | |||||||| | ||||||||| Sbjct 1947 CTCGTTGCTCTTGGTAATAAGAAGTTCTACAACACAACCAACCCCTTCGACTTTATGGAC 1888 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 || || ||| || || || ||||||||||| |||||||| | ||||| || Sbjct 1887 AATATCTCCCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGAGATTACCAGAAA 1828 Query 243742 CCTGGTGTGATG 243753 ||||||| ||| Sbjct 1827 GCTGGTGTCATG 1816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102833580814750