Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1055 93.3 4e-14 >seq1055 Length=3912 Score = 93.3 bits (102), Expect = 4e-14 Identities = 181/262 (69%), Gaps = 4/262 (2%) Strand=Plus/Plus Query 95104 GCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCC 95163 || |||||||| || ||| ||| ||||| |||||| |||||||| || ||||| Sbjct 2938 GCGCCCATGCCAACTGCCAGCACCAGTCAGATTCTTGGCTTCAACGAGTGCTTTGAACCT 2997 Query 95164 TTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAG 95223 | |||||||||| | ||| | || || || || || || |||| ||| ||||| | Sbjct 2998 TACACCTCCAACATCTACTCACGCCGTGTACTTGCTGGCGAGTTCCAAGTCGTCAACCCG 3057 Query 95224 CACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACT 95282 || || ||||| | || | || || ||||| ||||| | ||||||| | Sbjct 3058 TGGCTTCTCAAAGACCTAGTCGAC-CTCGGCCTGTGGTCCGACAATATGAAGAACCGTAT 3116 Query 95283 GCTACGC-GCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGC 95341 | ||| | | || ||| |||| |||||||| | || || | || |||||||| | Sbjct 3117 CAT-CGCTGACGGTGGTTCCATCCAAAACATCCCTAACATCCCAGCAGATATCAAGGCTC 3175 Query 95342 TCTACAAGACCGTGTGGGAGAT 95363 | ||||||||||||||||| || Sbjct 3176 TGTACAAGACCGTGTGGGAAAT 3197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494702885428600