Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq1055 84.2 3e-11
>seq1055
Length=3912
Score = 84.2 bits (92), Expect = 3e-11
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 203839 CTTGTCCACCGTGAACTGAATGGC-GTTCACGGCAGGCCTGCTTCTCAGATAGTACATGC 203897
|| ||| || ||||| || |||| | ||| ||| | || | | |||||||||||||
Sbjct 3402 CTGGTCTACTGTGAATTGGATGGGAGCAGACG-CAGCCATGGTGCGGAGATAGTACATGC 3344
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957
||||||| || || || ||| ||| | |||||| | | || | || | | |
Sbjct 3343 CGGTCTTGAGACCGAGCTTCCAGCCGGCGAAGTGCATACTGGTGATCTTTCCCATGGTCG 3284
Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016
| || || ||| ||||| || || || ||||||||| |||||||| ||||| |||
Sbjct 3283 GCTCTTTCAAGTGGATGTTGAGCGATTGAGACTGGTCGATG-AAGGCGCCTCGATCAGCG 3225
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA 204065
||||| | | ||| || || ||||| |||||||| |||||| |||
Sbjct 3224 GCCATCTGAACAATAGTACGTTGAGAAATTTCCCACACGGTCTTGTACA 3176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795122548939600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |