Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq1409 100 2e-16 >seq1409 Length=7126 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 ||||||||||| ||||| ||||||||||| ||||| || || || || || ||||| | | Sbjct 694 CCGCCTCGCAACCGCAGGACCAAATGCAACGTGCTCTCCTTCTGGATGTTGTAATCAGAC 635 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | || | || || | ||||| || |||| || | ||||||||| || | || Sbjct 634 AGCGTCCGGCCGTCCTCGAGCTGTTTTCCTGCAAAGATGAGACGCTGCTGGTCTGGTGGG 575 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCG-CTACTGTGTCTGCGCTTTCCAC 39671 | ||||| ||||| | | ||||| | ||| | ||| ||||| | ||| || Sbjct 574 ATACCTTCCTTGTC-CTGGATCTTTGTCTTGACGTTGTCTATCGTGTCGCTGGATTCTAC 516 Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 |||| || || ||||| ||||| | || || ||||||||||||||| Sbjct 515 CTCCAGCGTGATGGTTTTGCCCGTAAGTGTCTTGACGAAGATCTGCATG 467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347355692732405