Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1529 84.2 9e-11 >seq1529 Length=33713 Score = 84.2 bits (92), Expect = 9e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 420808 GTAAATACAACAGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAAC 420867 || || ||||| || |||| |||||| || | ||||| ||| || |||||||| || || Sbjct 5815 GTGAAAACAACGGTCTTTGCAGGCATGTTAAGACCAATAGAGAATGTTTCAGTCGCGAAG 5874 Query 420868 AAAACTTTAATTAAttttt-ttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAAT 420926 | |||||| |||| | || ||| | |||||||||||| |||| || | ||||| | Sbjct 5875 AGAACTTTTATTAGTCCTTCTTGGA-AAAGAATTTCAATGGTTTCCTTGAGGATAGGCAG 5933 Query 420927 TATACCAGAATGATG 420941 | ||| |||||||| Sbjct 5934 GAGACCGGAATGATG 5948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975635243864780