Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1055 122 1e-22
seq2158 120 4e-22
>seq1055
Length=3912
Score = 122 bits (134), Expect = 1e-22
Identities = 365/557 (66%), Gaps = 15/557 (3%)
Strand=Plus/Minus
Query 106754 GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 106813
|| ||||| || | ||| | ||| || ||||| ||||||||||| | || ||| ||
Sbjct 2131 GGGCAGAATAGGGTCCAATCGCCATTCTTTTCAACTCGCTTCATGAACAAATCAGGAGTC 2072
Query 106814 CACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 106872
||||||| | |||||||| | ||| || | ||||| | || ||||| || |
Sbjct 2071 CACAGGGCCAAGAAGAGATCACGGGCACGGA-CTTCTTCCTTTCCATGGTTCTTGCGGAG 2013
Query 106873 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGA 106926
||||||||||| | || ||| || ||||||||||| || |||| || | ||
Sbjct 2012 GTCAAGGAACTCAAAGACATCAGCATGCCATGGCTCCAGGTAGATAGCAAAGGCACCAGG 1953
Query 106927 TCCCTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 106985
| ||| | | ||||| || | ||||| | || ||| ||| || || |||||||
Sbjct 1952 ACGCTTGTTGCCGCCC----TGGTCGACATATCTGGCGGTGTTGTTGAACACACGAAGCA 1897
Query 106986 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 107045
| || | ||| || | || || || || || ||| ||| |||| | |
Sbjct 1896 TGGGTACAATTCCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAGGATCCGGTGGCACGGA 1837
Query 107046 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 107105
| |||| || | || ||||| || || ||||||||| ||||| | | |
Sbjct 1836 TACGGTGGACGTTAAGGCCGATACCTCCGGCAGTCTTTGAGATCAAAGCACAGGTCTTCA 1777
Query 107106 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 107165
| || | |||||||| | ||| ||||||||| || | || |||||||| | ||
Sbjct 1776 GTGTGTCGTAGATACCTTCGATACTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCA 1717
Query 107166 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCT 107224
| ||||| || || || |||||||||||||| || | || || |||| || |
Sbjct 1716 TTTGCGGCTGCGGGGTTCCGGCATTGAAGAGGGTGGGAGAGGCATGGGTGAAGTATTTC- 1658
Query 107225 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATG 107284
|||||||| | |||||| || | || |||| ||| || |||||||| ||||
Sbjct 1657 TGGGACATGAGATTGTATGTTTCAATTACTTTCTCAACGTCCTCGCCGTGGATACCGACC 1598
Query 107285 GCCACACGCATAAACAT 107301
|| || ||||| | |||
Sbjct 1597 GCAACTCGCATTATCAT 1581
Score = 120 bits (132), Expect = 4e-22
Identities = 676/1067 (63%), Gaps = 24/1067 (2%)
Strand=Plus/Minus
Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649
|||||||||||||| ||||||||||| || | ||||| || | |||||| | |
Sbjct 3359 CGGAGATAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCGGCGAAGTGCATACTGGTG 3300
Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709
| ||| ||| || || || || | | || | |||| |||||| ||||||
Sbjct 3299 ATCTTTCCCATGGTCGGCTCTTTCAAGTGGATGTTGAGCGATTGAGACTGGTCGATGAAG 3240
Query 105710 CGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGA--TTTCCCACACTGTGC 105767
|| || | || ||||| | || | | | | | || |||||||||| ||
Sbjct 3239 GCGCCTCGATCAGCGGCCATCTGAACAATAG--TACGTTGAGAAATTTCCCACACGGTCT 3182
Query 105768 GGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCT 105827
||| ||| ||||||||| ||||||| | | ||| ||||| || ||||| || |
Sbjct 3181 TGTACAGAGCCTTGATATCTGCTGGGATGTTAGGGATGTTTTGGATGGAACCACCGTCAG 3122
Query 105828 TGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAA--TCTTCTTGAGATCATTGAC 105885
|| || | | |||||||| | |||||| || || | || || || || ||||
Sbjct 3121 CGATGATACGGTTCTTCATATTGTCGGACCACAGGCCGAGGTCGACT--AGGTCTTTGAG 3064
Query 105886 GAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTC-TCAGATAGATGTTCG 105944
|| | |||||| | ||||| || || || | | | || |||||||| |
Sbjct 3063 AAGCCACGGGTTGACGACTTGGAACTCGCCAGCAAGTACACGGCGTGAG-TAGATGTTGG 3005
Query 105945 TCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATT-TGTGCGGTGGAGGCTGTTGGC 106003
||||| ||||||||||| || || | |||||| | || |||| ||| ||||||
Sbjct 3004 AGGTGTAAGGTTCAAAGCACTCGTTGA-AGCCAAGAATCTGACTGGTGCTGGCAGTTGGC 2946
Query 106004 ATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACA 106063
|| || || | | | |||||||| | ||| | | ||| | || ||| ||
Sbjct 2945 ATGGGCGCAAGTAGTAAGCTGTTACGGACACCGTGCTTGGAGATCTCAGCTTTAAGACCA 2886
Query 106064 TCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTG 106122
|||||||| || | | |||| | || |||| ||||||| ||||||| | || ||
Sbjct 2885 TCCCAGTCCCAGAGGTCGGTTGGCGTTACGTTCC-ACATATCGTATTGAAGGATACCCTG 2827
Query 106123 GGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCT 106182
|| || ||||||||| | | || | ||| | | | | || | |||||
Sbjct 2826 AGAAACAGGGGAACCCTCATAGGAGGAGTATGGACCATCGACCTTGGCAAGCTCACACGA 2767
Query 106183 CGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTC 106242
|| || | || || || | ||| || ||||| | | |||| |||||||||
Sbjct 2766 TGCGGTCAACGCAGCATGGTAAAGGGTCTCGAAGATTTGGGTGTTCAAAAGCTTGGCTTC 2707
Query 106243 ATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAA 106302
||| || || | | || | || |||| || || || || || || |
Sbjct 2706 GGGTGAGTCGAAGGGCAATCGAAGAGCGAGGAAAGCATCAGCAAGTCCCTGGACGCCGAC 2647
Query 106303 ACCAATAGGTCTGTGTCGCATATTAGACTT--TCGCGCAGTCTCAACGGGATAAAAATTT 106360
| |||| || | || || | ||| ||| ||| || ||||| || || ||
Sbjct 2646 AGCAATGGGACGATGACGGAAATTG--CTTCGTCGTGCCTCTTCAACCGGGTAGTGGTTC 2589
Query 106361 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA 106420
| || |||| | ||| | ||| || ||| | || || | |||||| ||||| ||
Sbjct 2588 CCATCTATGATCCTGTTCAAGTTTCTGACAACGACCTGAGTAACTTCATGGAGTTTGCCA 2529
Query 106421 TAATCAAA---AGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAA 106477
|||| | | |||| | ||| ||| | | ||||||||||| ||||||||
Sbjct 2528 AAATCGTATTCACCGCGAA---CAGCATCCACAAAGGTGGGAAGGGCGATAGATGCCAAG 2472
Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537
|||||||| || |||||| | || || || | ||||| || || | || ||
Sbjct 2471 TTGCAAACTGCAACCTCATCTGGGGCGGTATATTCAACGATTTCAGTGCAAAGATTTGAG 2412
Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597
|| || || || | ||||| ||||| |||||| |||||| | ||||||||| |||
Sbjct 2411 CTACGGATAGTACCAAGGTTCTTCTGGTTGCTCTTTCGGTTGCAGGAATCCTTGTAAAGC 2352
Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644
|| | || | || ||||||||||| | || ||||| || | |||
Sbjct 2351 ATAAAAGGGTTTCCAGTCTCCGTCTGGGCCTCAAGAATGGCGTACCA 2305
>seq2158
Length=8959
Score = 120 bits (132), Expect = 4e-22
Identities = 344/525 (66%), Gaps = 32/525 (6%)
Strand=Plus/Plus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
|| || ||||| |||||||| |||||||||||||| ||| ||||| || || ||||||
Sbjct 1835 TAATCTCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGGGAGATATTGTCCATA 1894
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA--TGGGTGGCACCC----CAACTTGTTTGAGG 117099
||||| || || || | | ||| | | | | ||| |||| |||
Sbjct 1895 AAGTCGAAGGGGTTGGTTGTGTTGTAGAACTTCTTATTACCAAGAGCAAC------GAGA 1948
Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159
|| | ||| | || |||||||||||| |||| || || ||||| |||| ||
Sbjct 1949 AGCCTATCGGCGACGAACTCAATGTACTGACACATGAGCTTAGCATTCATGCCGAGAAGG 2008
Query 117160 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 117219
||| ||||| || || | |||| | | ||| || || || || | | ||||
Sbjct 2009 GCACAGGGGAGGGCATCAGTCAGGAACTCCTGCTCGATGGTGACTGCTTCAGTGATGATG 2068
Query 117220 GCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGA----AGAGCTC------ 117269
|| | || ||| | |||| | || | ||| ||| |||| |
Sbjct 2069 GCCTCGA------CGGCACTGGGGTCAGGGCG-ATAGT--TGAGGTGAGAGAACAGAAGG 2119
Query 117270 CACGGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAG 117329
|| |||||| || ||| || || || || ||||| |||||||| || |||||| ||
Sbjct 2120 CA-GGCAAAATCAGTGTGTAGGCCTTCGTCACGGGAGATAAGTTCGTTGGAGAAGGTGAG 2178
Query 117330 GCCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAA 117389
|| ||||||||||| |||||||| | ||| | || | | ||| || ||| ||||||
Sbjct 2179 TCCGGGCATGAGACCACGCTTCTTTAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAA 2238
Query 117390 GATACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC 117449
|||||||| ||| ||||| |||| |||||||| |||||||| | | ||| |
Sbjct 2239 AATACCCTCGACAGCAGCAAAGGCAACAAGGCGCTGGGCGAAGGTGGAATTCTTATCTTG 2298
Query 117450 AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTAC 117494
| |||| || ||||| | |||||||| |||||||| ||
Sbjct 2299 GATCCATCGGATGGCCCAATCGGCCTTCTTGCGGATACATGGAAC 2343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589956573913400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |