Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq1032 95.1 1e-14
>seq1032
Length=37845
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 153774 TTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAG 153833
|| ||| | || ||||| | || ||||| || ||||| |||||||| || || ||
Sbjct 9053 TTCGGTGTCCCCATGGGCTTCGGCGGTCCCCAGGCTGCCTTCTTTGCTTGCACTGAGAAA 8994
Query 153834 TATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATAAA 153893
| ||| ||||||| |||||| | || || ||| || || || || ||
Sbjct 8993 CACAAGCGAAAGATCCCTGGCCGTATCGTCGGTGTCTCCAAGGACAGACTTGGAAACCGT 8934
Query 153894 GCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGT 153953
|| | | | || || ||||| | ||||||||||| | | || || || |||||
Sbjct 8933 GCCTTGCGTCTTGCCCTGCAGACCCGTGAGCAGCATATTCGTCGTGAGAAGGCCACCAGC 8874
Query 153954 AACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAG 154005
||||||||||| || ||||||||||| || || ||||||| ||||| ||||
Sbjct 8873 AACATCTGCACTGCCCAGGCACTGCTCGCAAACATGTCTGCTTTCTACGCAG 8822
Score = 82.4 bits (90), Expect = 9e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 153216 GGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAGT 153275
||||||||||| ||||| ||||| ||||| ||||||||||| || ||||| || |
Sbjct 9638 GGATACTATGGCACCATCGTGCCCCCGGTCATCCAGCGAAACGTCCTCGAGAACCCCATC 9579
Query 153276 TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTA 153335
|||||||| |||||||| || || ||||||| ||||| | | || || |
Sbjct 9578 TGGTACACCAGCTACACTCCTTACCAGCCTGAGATCAGCCAGGGCCGTCTCGAGTCTCTC 9519
Query 153336 TTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCTA 153395
|||| | ||| || || | | | || || || || | || | || || || || |
Sbjct 9518 CTCAACTTCCAGACCCTTACCTCTGACCTGACTGGTCTGCCCGTTGCCAATGCCTCCGTC 9459
Query 153396 TTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428
| || ||||| || || || ||||| || |||
Sbjct 9458 CTCGACGAAGCTACCGCCGCCGCAGAGGCCATG 9426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579189016074400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |