Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1032 91.5 2e-13 >seq1032 Length=37845 Score = 91.5 bits (100), Expect = 2e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 157891 GGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAGT 157950 ||||||||||| |||||| ||||| ||||| ||||||||||| || ||||| || | Sbjct 9638 GGATACTATGGCACCATCGTGCCCCCGGTCATCCAGCGAAACGTCCTCGAGAACCCCATC 9579 Query 157951 TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTA 158010 |||||||| |||||||| || || ||||||| ||||| | | || || | Sbjct 9578 TGGTACACCAGCTACACTCCTTACCAGCCTGAGATCAGCCAGGGCCGTCTCGAGTCTCTC 9519 Query 158011 TTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGCATCTCTA 158070 |||| | ||| || || | | | || || || || || || | || || || || | Sbjct 9518 CTCAACTTCCAGACCCTTACCTCTGACCTGACTGGTCTGCCCGTTGCCAATGCCTCCGTC 9459 Query 158071 TTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 | || ||||| || || || ||||| || ||| Sbjct 9458 CTCGACGAAGCTACCGCCGCCGCAGAGGCCATG 9426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588027053147600