Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= NC_018847.1
Length=29516
Score E
Sequences producing significant alignments: (Bits) Value
seq613 358 1e-94
>seq613
Length=305
Score = 358 bits (396), Expect = 1e-94
Identities = 249/282 (88%), Gaps = 2/282 (1%)
Strand=Plus/Minus
Query 16685 GTGCCCCAGCAGCCGCCACCACAA--CACGTGGAAGCACCGCTGGGGCACTATTTTTGTG 16742
||||||||||||| |||||||||| ||||||| ||||||||||||||||| ||||||||
Sbjct 295 GTGCCCCAGCAGCAGCCACCACAAAACACGTGGCAGCACCGCTGGGGCACTCTTTTTGTG 236
Query 16743 TCTACAGGGGTTTTACAGGTTGTCGTCTAGGGTATCTTCGAGTGTCTGCTGTAGGAGTGC 16802
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 235 TCTACAGGGGTTTTACAGGTTGTCGTCTAGGGTGTCTTCGAGTGTCTGGTGTAGGAGTGC 176
Query 16803 GCATTCGGCGAGGGTGTTTTCAGCCTGGTCGACAATGTTTCGTTGAATGATGCCGGGATA 16862
||||||||||||||||||| ||||||||||||| ||||||| | ||||||||||||||
Sbjct 175 ACATTCGGCGAGGGTGTTTTTAGCCTGGTCGACAGTGTTTCGCGGGATGATGCCGGGATA 116
Query 16863 GTTGTCGCGGTGATTGTAGATGGCCTCGATAATGTTGTTTGCCATGATTTGTAGTGTTAG 16922
|||||||||||||||||||||||| || | |||||||| ||||||| | ||| ||||
Sbjct 115 GTTGTCGCGGTGATTGTAGATGGCTTCCAGAATGTTGTCTGCCATGGTGGCGAGTTTTAG 56
Query 16923 GGCCTGGTTAGAGAGGCATGCCAGCTCGTCTAGGGCCGCCTG 16964
||||||| | |||| | ||||| |||| ||||| |||||
Sbjct 55 TGCCTGGTAGGTGAGGGTTTCCAGCCCGTCCAGGGCTGCCTG 14
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 94325920261260
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |