Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_018847.1 Length=29516 Score E Sequences producing significant alignments: (Bits) Value seq613 358 1e-94 >seq613 Length=305 Score = 358 bits (396), Expect = 1e-94 Identities = 249/282 (88%), Gaps = 2/282 (1%) Strand=Plus/Minus Query 16685 GTGCCCCAGCAGCCGCCACCACAA--CACGTGGAAGCACCGCTGGGGCACTATTTTTGTG 16742 ||||||||||||| |||||||||| ||||||| ||||||||||||||||| |||||||| Sbjct 295 GTGCCCCAGCAGCAGCCACCACAAAACACGTGGCAGCACCGCTGGGGCACTCTTTTTGTG 236 Query 16743 TCTACAGGGGTTTTACAGGTTGTCGTCTAGGGTATCTTCGAGTGTCTGCTGTAGGAGTGC 16802 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 235 TCTACAGGGGTTTTACAGGTTGTCGTCTAGGGTGTCTTCGAGTGTCTGGTGTAGGAGTGC 176 Query 16803 GCATTCGGCGAGGGTGTTTTCAGCCTGGTCGACAATGTTTCGTTGAATGATGCCGGGATA 16862 ||||||||||||||||||| ||||||||||||| ||||||| | |||||||||||||| Sbjct 175 ACATTCGGCGAGGGTGTTTTTAGCCTGGTCGACAGTGTTTCGCGGGATGATGCCGGGATA 116 Query 16863 GTTGTCGCGGTGATTGTAGATGGCCTCGATAATGTTGTTTGCCATGATTTGTAGTGTTAG 16922 |||||||||||||||||||||||| || | |||||||| ||||||| | ||| |||| Sbjct 115 GTTGTCGCGGTGATTGTAGATGGCTTCCAGAATGTTGTCTGCCATGGTGGCGAGTTTTAG 56 Query 16923 GGCCTGGTTAGAGAGGCATGCCAGCTCGTCTAGGGCCGCCTG 16964 ||||||| | |||| | ||||| |||| ||||| ||||| Sbjct 55 TGCCTGGTAGGTGAGGGTTTCCAGCCCGTCCAGGGCTGCCTG 14 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94325920261260