Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq1032 122 1e-22
>seq1032
Length=37845
Score = 122 bits (134), Expect = 1e-22
Identities = 166/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 139282 CTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTG 139341
|||| ||||| ||||||| |||||||||||||| || || ||||||||||| ||||| |
Sbjct 8822 CTGCGTAGAAAGCAGACATGTTTGCGAGCAGTGCCTGGGCAGTGCAGATGTTGCTGGTGG 8881
Query 139342 CTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGC 139401
| || || | | |||||||||||| | || || || || | | | ||| | || |
Sbjct 8882 CCTTCTCACGACGAATATGCTGCTCACGGGTCTGCAGGGCAAGACGCAAGGCACGGTTTC 8941
Query 139402 CTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTG 139461
| |||||| || ||| || || | |||||| ||||||| ||| | || || |
Sbjct 8942 CAAGTCTGTCCTTGGAGACACCGACGATACGGCCAGGGATCTTTCGCTTGTGTTTCTCAG 9001
Query 139462 TTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACCAAA 139513
| |||||||| ||||| || ||||| ||| | ||||| || | ||| ||
Sbjct 9002 TGCAAGCAAAGAAGGCAGCCTGGGGACCGCCGAAGCCCATGGGGACACCGAA 9053
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918
||| |||||||| || || || ||||| || | | || || || || | || | ||
Sbjct 9426 CATGGCCTCTGCGGCGGCGGTAGCTTCGTCGAGGACGGAGGCATTGGCAACGGGCAGACC 9485
Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978
|| || || | | | || || ||| | |||| | || || | | ||||| ||
Sbjct 9486 AGTCAGGTCAGAGGTAAGGGTCTGGAAGTTGAGGAGAGACTCGAGACGGCCCTGGCTGAT 9545
Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038
||||| || || |||||||| |||||||| | || ||||| || |||||||||||
Sbjct 9546 CTCAGGCTGGTAAGGAGTGTAGCTGGTGTACCAGATGGGGTTCTCGAGGACGTTTCGCTG 9605
Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCC 140071
||||| ||||| ||||| |||||||||||
Sbjct 9606 GATGACCGGGGGCACGATGGTGCCATAGTATCC 9638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578974624878200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |