Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1055 174 2e-38 seq2158 120 4e-22 >seq1055 Length=3912 Score = 174 bits (192), Expect = 2e-38 Identities = 693/1072 (65%), Gaps = 34/1072 (3%) Strand=Plus/Plus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | || ||||| | | |||||||||||||||| || | |||||||||||||||| Sbjct 2305 TGGTACGCCATTCTTGAGGCCCAGACGGAGACTGGAAACCCTTTTATGCTTTACAAGGAT 2364 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 | || ||| ||||| ||||| ||||| | || || ||| ||||||||||||||| Sbjct 2365 TCCTGCAACCGAAAGAGCAACCAGAAGAACCTTGGTACTATCCGTAGCTCAAATCTTTGC 2424 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057 || ||||| | || || || | |||||| || |||||||| |||||||| ||| Sbjct 2425 ACTGAAATCGTTGAATATACCGCCCCAGATGAGGTTGCAGTTTGCAACTTGGCATCTATC 2484 Query 76058 GCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACT---TTTGATTATGAAAAACTTCAT 76114 |||||||| | | ||| ||| | |||| | | |||| || ||||| ||| Sbjct 2485 GCCCTTCCCACCTTTGTGGATGCTG---TTCGCGGTGAATACGATTTTGGCAAACTCCAT 2541 Query 76115 GAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCC 76174 ||| | || || | ||| || ||| | ||| | |||| || | || || || Sbjct 2542 GAAGTTACTCAGGTCGTTGTCAGAAACTTGAACAGGATCATAGATGGGAACCACTACCCG 2601 Query 76175 GTTGAGACTGCGCGA--AAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAG 76232 ||||| || ||| ||| ||| | || || | || |||| | | || || || | Sbjct 2602 GTTGAAGAGGCACGACGAAG--CAATTTCCGTCATCGTCCCATTGCTGTCGGCGTCCAGG 2659 Query 76233 GTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGA 76292 | || || |||| || | || | | || || ||| ||||||||| Sbjct 2660 GACTTGCTGATGCTTTCCTCGCTCTTCGATTGCCCTTCGACTCACCCGAAGCCAAGCTTT 2719 Query 76293 TGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGG 76352 |||| | | ||||| || ||| | || || || | || || ||||| | | Sbjct 2720 TGAACACCCAAATCTTCGAGACCCTTTACCATGCTGCGTTGACCGCATCGTGTGAGCTTG 2779 Query 76353 CTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTC 76412 | | | | | ||| | || | | ||||||||| || | || || || | |||| Sbjct 2780 CCAAGGTCGATGGTCCATACTCCTCCTATGAGGGTTCCCCTGTTTCTCAGGGTATCCTTC 2839 Query 76413 AGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAACTACGACTGGGATGTTCTCAAGGAA 76471 | | ||||||| |||| || | |||| | | || |||||||||| ||| || | Sbjct 2840 AATACGATATGT-GGAACGTAACGCCAACCGACCTCTGGGACTGGGATGGTCTTAAAGCT 2898 Query 76472 CGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCC 76531 ||| || | ||| | |||||||| | | | || || |||||||| ||| | Sbjct 2899 GAGATCTCCAAGCACGGTGTCCGTAACAGCTTACTACTTGCGCCCATGCCAACTGCCAGC 2958 Query 76532 ACCGCACA-AATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCT 76590 ||| || | |||||| | || || ||||||||||| ||||| | ||||||||| Sbjct 2959 ACCAGTCAGATTCTTGGCT-TCAACGAGTGCTTTGAACCTTACACCTCCAACATCTACTC 3017 Query 76591 GAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAA 76650 | | || || || ||||| | |||||| | || |||| ||||| | Sbjct 3018 ACGCCGTGTACTTGCTGGCGAGTTCCAAGTCGTCAACCCGTGGCTTCTCAAAGACCT--A 3075 Query 76651 GAAGA--TTGGTCTCTGGTCCAAGGATATGAAGGA---TCTCAT-GGTGAAAGCGGGTGG 76704 | || | || || |||||| | |||||||| | | |||| | ||| ||||| Sbjct 3076 GTCGACCTCGGCCTGTGGTCCGACAATATGAAGAACCGTATCATCGCTGA----CGGTGG 3131 Query 76705 TTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTG 76764 |||||| ||||| ||| | | ||||||| ||||||||| ||| ||| || ||||| Sbjct 3132 TTCCATCCAAAACATCCCTAACATCCCAGCAGATATCAAGGCTCTGTACAAGACCGTGTG 3191 Query 76765 GGAAA--TCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGAT 76822 ||||| || | | | | | || | |||||||| ||||| || |||||| || Sbjct 3192 GGAAATTTCTCAACGTA--CTATTGTTCAGATGGCCGCTGATCGAGGCGCCTTCATCGAC 3249 Query 76823 CAAAGTCAAAGTATGAATCTATTCA-TGGAAAG-TCCAACGATGTCCAAGCTCTCTTCTA 76880 || |||| | || || || | ||||| || || ||| ||| || | || Sbjct 3250 CAGTCTCAATCGCTCAA--CATCCACTTGAAAGAGCCGACCATGGGAAAGATCACCAGTA 3307 Query 76881 TGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932 |||| | || ||||| | || ||||| ||||| |||||||||||||| Sbjct 3308 TGCACTTCGCCGGCTGGAAGCTCGGTCTCAAGACCGGCATGTACTATCTCCG 3359 Score = 138 bits (152), Expect = 1e-27 Identities = 374/566 (66%), Gaps = 15/566 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| | ||| | ||||| || || |||| |||||||| || ||| |||| || Sbjct 1572 CCACAGCATATGATAATGCGAGTTGCGGTCGGTATCCACGGCGAGGACGTTGAGAAAGTA 1631 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCTT 75330 | || |||||| | |||||||| | || |||| || || | || |||||||| Sbjct 1632 ATTGAAACATACAATCTCATGTCCCA-GAAATACTTCACCCATGCCTCTCCCACCCTCTT 1690 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 |||||| || || || ||||| ||| | |||||||| || | || |||||||| Sbjct 1691 CAATGCCGGAACCCCGCAGCCGCAAATGGCTTCCTGCTTCCTCATTGACATGAAGGAGGA 1750 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | ||| | |||||||| | || || | | ||||| ||||||||| || || Sbjct 1751 CAGTATCGAAGGTATCTACGACACACTGAAGACCTGTGCTTTGATCTCAAAGACTGCCGG 1810 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 ||||| || | || |||| | | | |||| ||| ||| || || || Sbjct 1811 AGGTATCGGCCTTAACGTCCACCGTATCCGTGCCACCGGATCCTACATTGCTGGAACCAA 1870 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 || || | || ||| | || |||||||| || || ||| ||| || | |||| Sbjct 1871 CGGCTCCTCCAACGGAATTGTACCCATGCTTCGTGTGTTCAACAACACCGCCAGATATG- 1929 Query 75571 AAATCAAGCGGGGCGTC-GCAAG------GGGTCCATCGCGGTCTACTTGGAACCATGGC 75623 || | | ||||| | |||| || || | || ||||| |||| ||||||| Sbjct 1930 ---TCGACCAGGGCGGCAACAAGCGTCCTGGTGCCTTTGCTATCTACCTGGAGCCATGGC 1986 Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683 |||| ||| || | ||||||||||| | || ||||| || | ||||| | || || Sbjct 1987 ATGCTGATGTCTTTGAGTTCCTTGACCTCCGCAAGAACCATGGAAAGGAAGAAG-TCCGT 2045 Query 75684 G-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 | | |||||||| | ||||||||| ||| || | ||||||||||| ||||| || Sbjct 2046 GCCCGTGATCTCTTCTTGGCCCTGTGGACTCCTGATTTGTTCATGAAGCGAGTTGAAAAG 2105 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCC 75768 ||| | ||| | || ||||| || Sbjct 2106 AATGGCGATTGGACCCTATTCTGCCC 2131 >seq2158 Length=8959 Score = 120 bits (132), Expect = 4e-22 Identities = 344/525 (66%), Gaps = 32/525 (6%) Strand=Plus/Minus Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGC 65067 || |||||||| |||||||| | ||||| || |||| | | ||| | | Sbjct 2343 GTTCCATGTATCCGCAAGAAGGCCGATTGGGCCATCCGATGGATCCAAGATAAGAATTCC 2284 Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 |||||||| |||||||| |||| ||||| ||| |||||||| |||||| ||| || Sbjct 2283 ACCTTCGCCCAGCGCCTTGTTGCCTTTGCTGCTGTCGAGGGTATTTTCTTCAGCGGCTCC 2224 Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 ||| | | || | ||| | |||||||| ||||||||||| || || |||||| || Sbjct 2223 TTCGCCTCCATCTTCTGGCTAAAGAAGCGTGGTCTCATGCCCGGACTCACCTTCTCCAAC 2164 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTG------GAGCTCT-- 65239 |||||||| ||||| || || || || ||| || |||||| || | |||| Sbjct 2163 GAACTTATCTCCCGTGACGAAGGCCTACACACTGATTTTGCC-TGCCTTCTGTTCTCTCA 2105 Query 65240 --TCAAGACTTTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGC 65297 ||| ||| | || | |||| | ||| || | |||||| | | || || Sbjct 2104 CCTCA--ACTAT-CGCCCTGACCCCAGTGCCG------TCGAGGCCATCATCACTGAAGC 2054 Query 65298 GGTTGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAA 65357 || || ||| | | |||| | || || ||||| ||| || |||| ||||| Sbjct 2053 AGTCACCATCGAGCAGGAGTTCCTGACTGATGCCCTCCCCTGTGCCCTTCTCGGCATGAA 1994 Query 65358 CTCTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTG- 65416 || || |||| |||||||||||| || | ||| | || ||| |||| Sbjct 1993 TGCTAAGCTCATGTGTCAGTACATTGAGTTCGTCGCCGATAGGCTTCTC------GTTGC 1940 Query 65417 ---GGGTGCCACCCA--TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAG 65471 ||| | | | | ||| | | || || || ||||||||||| || || Sbjct 1939 TCTTGGTAATAAGAAGTTCTACAACACAACCAACCCCTTCGACTTTATGGACAATATCTC 1880 Query 65472 CCTTGATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 ||||| ||| |||||||||||||| |||||||| ||||| || || Sbjct 1879 CCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGAGATTA 1835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596545103360800