Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq2281 199 5e-46
seq1606 161 1e-34
seq1409 134 2e-26
seq1418 131 2e-25
seq1523 127 3e-24
seq591 122 1e-22
seq2131 93.3 6e-14
seq2769 89.7 7e-13
>seq2281
Length=20370
Score = 199 bits (220), Expect = 5e-46
Identities = 352/509 (69%), Gaps = 3/509 (1%)
Strand=Plus/Plus
Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364
||||||||||| || || || ||||| || || ||| | | | |||| || | ||
Sbjct 19864 GGTATCGATTTGGGTACCACGTACTCCTGCGTGGGTATCTTCCGTGATGACCGCATTGAA 19923
Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424
|| ||| | || ||||| ||||||||||| ||||| || | ||||||||| ||||| |
Sbjct 19924 ATCATCGCCAACGACCAGGGAAACCGTACCACTCCCTCCTTCGTTGCCTTCACAGACACC 19983
Query 195425 GAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTC 195484
|| |||||| |||||||||||||||| || ||| || ||||||||| |||| || |||
Sbjct 19984 GAGCGTCTCATTGGAGATGCCGCAAAGAACCAGGTCGCCATGAACCCTGTCAACACCGTC 20043
Query 195485 TTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATA 195544
|| || || |||||||| ||||| |||||||| || | ||||| | ||| ||
Sbjct 20044 TTCGATGCTAAGCGTCTCATTGGACGCAAGTTCAACGACGCCGAGGTCCAGGCCGACATG 20103
Query 195545 AAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGAA 195604
||| ||| | | | ||| | || | | ||| | ||||| || | | || ||
Sbjct 20104 AAGCACTTCCCCT-TCAAGATTGTCGAGAAG-GGC-GGCAAGCCCATCGTCCAGGTCGAG 20160
Query 195605 TTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAG 195664
|| | || ||| |||| || || | || || ||||| || || ||||| | | |||
Sbjct 20161 TTCAAGGGCGAGGAGAAGCAGTTCACCCCTGAGGAAATCTCCTCCATGGTCCTTACCAAG 20220
Query 195665 ATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTA 195724
||| ||||| || || | | | | ||| || || || | || || | |||||
Sbjct 20221 ATGCGTGAGACCGCCGAGGCCTACCTTGGTGGCACCGTCAACAACGCTGTCATCACTGTC 20280
Query 195725 CCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGT 195784
||||| ||||||| || || || || ||||| || |||||||| | | ||||| |||
Sbjct 20281 CCTGCCTACTTCAACGACTCCCAGCGTCAGGCTACTAAGGACGCCGGTCTCATTGCCGGT 20340
Query 195785 CTAAACTGTCTTAGAATTATCAATGAACC 195813
|| ||| || | || ||||| || ||
Sbjct 20341 CTCAACGTCCTCCGTATCATCAACGAGCC 20369
>seq1606
Length=48028
Score = 161 bits (178), Expect = 1e-34
Identities = 332/492 (67%), Gaps = 9/492 (2%)
Strand=Plus/Minus
Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778
||||| || || ||||||| || || ||||||| || ||||| |||| ||| |||
Sbjct 5790 ACTGTCCCAGCCTACTTCAACGACAACCAGAGACAGGCCACCAAGGATGCTGGTGCCATT 5731
Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838
|| ||||| ||| ||| | || ||||| || || || || || || ||||| || |||
Sbjct 5730 GCCGGTCTCAACGTTCTCCGTATCATCAACGAGCCCACTGCTGCCGCCATTGCCTACGGT 5671
Query 195839 CTGGACAAGAACAAGGACGAAGATAAA---AATGTATTGATCTTTGATCTCGGTGGTGGT 195895
|| | | ||| ||| | | ||||| | |||| |||||||||||||||
Sbjct 5670 CTCGGCTCTGGAAAGTCCGAGAAGGAGCGCAATGTCCTCATCTACGATCTCGGTGGTGGT 5611
Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955
|| || |||||||| || ||||| || | |||||| | ||| || ||||| || ||
Sbjct 5610 ACTTTCGATGTCTCTCTCCTCAACATCCAGGGTGGTGTCTTCACCGTCAAGGCCACCGCC 5551
Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGAT 196015
||||| || ||||| |||||| | || ||||| | || ||| || || |
Sbjct 5550 GGTGACACCCATCTTGGTGGTCAGGACTTCGACACCAACCTCCTCGACCACTTCAAGAAG 5491
Query 196016 GAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTT 196075
|||||| || |||| ||||| ||| | ||||| | | || || || || | ||
Sbjct 5490 GAGTTCACCCGCAAGACCAAGAAGGATCTCTCTGGTGACTCCAGAGCCCTCCGAAGACTC 5431
Query 196076 AGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT---CAAACAATGGTT 196132
| ||||| || || ||||| || || ||||| ||| | ||| || || | ||
Sbjct 5430 CGCACTGCTTGCGAGCGTGCTAAGCGTACTCT---TTCCAGCGCTACCCAGACTACTGTC 5374
Query 196133 GAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTT 196192
|||||||| || | || ||||| |||||| || | || |||||||| |||||
Sbjct 5373 GAGATTGACTCTCTCTTCGACGGTGAGGACTTCAATGCCCAGATCACCCGTGCTCGTTTC 5314
Query 196193 GAAGAGTTAAAC 196204
|| || || |||
Sbjct 5313 GAGGACTTGAAC 5302
>seq1409
Length=7126
Score = 134 bits (148), Expect = 2e-26
Identities = 145/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||| || || || ||||| || ||||| ||||| || ||||| || ||
Sbjct 468 ATGCAGATCTTCGTCAAGACACTTACGGGCAAAACCATCACGCTGGAGGTAGAATCCAGC 527
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || ||| |||| | ||||| || || |||||||| || ||||| || |||
Sbjct 528 GACACGATAGACAACGTCAAGACAAAGATCCAGGACAAGGAAGGTATCCCACCAGACCAG 587
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| || || || ||||| || |||||||| || || || || || || |||||||||||
Sbjct 588 CAGCGTCTCATCTTTGCAGGAAAACAGCTCGAGGACGGCCGGACGCTGTCTGATTACAAC 647
Query 172042 GTTCAAAAGGAG 172053
| || ||||||
Sbjct 648 ATCCAGAAGGAG 659
>seq1418
Length=31151
Score = 131 bits (144), Expect = 2e-25
Identities = 526/813 (65%), Gaps = 29/813 (4%)
Strand=Plus/Plus
Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691
||||| || | || | ||||| ||| |||||||||||| | || || | | |
Sbjct 4606 CCCGAGGAGGTCTCCGCCATGGTTTTGGGTAAGATGAAGGACATCGCCGAGAAGTACCTC 4665
Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751
|| | ||||| | |||| || || ||||| || || ||||||| ||| || ||
Sbjct 4666 GGAGAGACTGTCAGCCATGCTGTCGTCACTGTCCCCGCCTACTTCAATGACAACCAGAGA 4725
Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGA 195810
||||| || || || || | | | || || ||||| ||| ||| | | || | || ||
Sbjct 4726 CAGGCCACCAAAGATGCCGGTACCATCGCCGGTCTTAAC-GTCATCCGTGTTGTTAACGA 4784
Query 195811 ACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGT 195870
||||| || || || ||||| || ||||| |||| || ||||| | | ||
Sbjct 4785 GCCAACTGCCGCAGCTATTGCCTACGGTCTTGACATGACTGGTGACGA-GCGCCAGATC- 4842
Query 195871 ATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGG 195930
|||| ||| ||||||||||||||||| || |||||||| || ||| ||||| ||
Sbjct 4843 ATTG-TCTACGATCTCGGTGGTGGTACTTTCGATGTCTCTCTCCTCTCCATTGACAAGGG 4901
Query 195931 TATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGC 195990
| ||||| || |||||| ||||| || ||||| | |||||||||||||||||
Sbjct 4902 TGCCTTCGAGGTCTTGGCTACCGCTGGCGACACTCACTTGGGTGGTGAAGATTTCGACCA 4961
Query 195991 ACGTCTTCTCCGTCA-TTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGAT----ATT 196045
||| | || || || ||| || || || || ||| | ||| ||
Sbjct 4962 GCGTGTCATCAACCACTTCGTC----AAGCTC---TACAACAAGAAGCACGATGTCGATA 5014
Query 196046 TCTGGAA-ATCCT-AGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAA 196103
|| || | ||| | | | | || ||| | | || ||| ||||| || |
Sbjct 5015 TCACCAAGAACCTCAAGACCATGGGTAAGCTCAAGCGTGAGGTTGAGAAGGCCAAGCGTA 5074
Query 196104 CTCTCTCTTC---TACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTG 196160
| || ||||| | | || || |||| || || || || || || | |
Sbjct 5075 CCCTTTCTTCCCAGAAGTCT---ACCCGCATTGAAATCGAATCTTTCCACGATGGCAAGG 5131
Query 196161 ACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGA 196220
|||||| | || |||||||||| ||||| || || ||| ||| | || | ||
Sbjct 5132 ACTTCTCTGAGACCCTTACCCGTGCCAAATTTGAGGAATTGAACATGGATCTCTTCAAGA 5191
Query 196221 AGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTG 196280
|| | | | || |||||||| || ||| || || ||| | | |||||| || |||
Sbjct 5192 AGACTCTCAAGCCAGTTGAACAGGTTCTTAAGGATGCCAAGGTCAAGAAGTCTGAGATTG 5251
Query 196281 ATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTA 196340
| || || |||||||| || || || ||||||||||| ||| | || || | |||
Sbjct 5252 ACGACATCGTCCTTGTTGGTGGCTCTACCCGTATTCCTAAGGTCCAGGAGCTCCTTGAGG 5311
Query 196341 GCTTCTTCAAT--AATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTA 196398
| |||| | || ||| | | ||| ||||||||| || || || ||||| |
Sbjct 5312 AGTACTTCGGTGGAAAGAAGGCT--AGCAAGCAGATCAACCCCGACGAGGCTGTTGCCTT 5369
Query 196399 TGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGG 196431
|||||| || |||||||||| | | || || ||
Sbjct 5370 TGGTGCCGCTGTTCAGGCTGGTGTCCTTTCCGG 5402
>seq1523
Length=68861
Score = 127 bits (140), Expect = 3e-24
Identities = 198/280 (71%), Gaps = 16/280 (6%)
Strand=Plus/Plus
Query 195713 GTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCT 195772
||||| ||||| ||||||||||||| || || ||||| ||||| || ||||| |||| |
Sbjct 3436 GTTGTCACTGTTCCTGCTTACTTCAACGACTCTCAACGTCAGGCTACCAAGGATGCTGGT 3495
Query 195773 GCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCT 195832
||||| ||||| ||| ||| | | |||| || || || || ||||| ||||
Sbjct 3496 CAAATTGCTGGTCTTAACGTTCTCCGTGTCGTCAACGAGCCTACCGCTGCTGCTCTTGCC 3555
Query 195833 TATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGT-ATTG--ATCTTTGATCTCGGT 195889
|| ||||| || ||| | ||||| ||| |||| ||| ||||| |||
Sbjct 3556 TACGGTCTCGAGAAGGAGCAGGAC---------CGTGTCATTGCTGTCTACGATCTTGGT 3606
Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATT--GAAGGTGGTATATTCGAAGTAAAGG 195947
|||||||| || ||| |||| ||||| | ||| |||| ||| | ||||| || |||
Sbjct 3607 GGTGGTACTTTCGATATCTCCATTCTCGAGATTCAGAAG--GGTGTGTTCGAGGTCAAGT 3664
Query 195948 CTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
| || || || || ||||| || ||||||||||||||
Sbjct 3665 CCACCAACGGAGACACCCATCTCGGAGGTGAAGATTTCGA 3704
>seq591
Length=274
Score = 122 bits (134), Expect = 1e-22
Identities = 138/185 (75%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 195803 ATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGAT 195862
||||| || || || || ||||| ||||| || ||||| || ||||| | || | ||
Sbjct 2 ATCAACGAGCCCACTGCTGCTGCCATTGCCTACGGTCTCGATAAGAAGACCGAGGGTGAG 61
Query 195863 AAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATT 195922
|| || | ||||| ||||||||||||||||| || |||||||| || || | ||
Sbjct 62 CGCAACGTTCTCATCTTCGATCTCGGTGGTGGTACCTTCGATGTCTCCCTCCTGACCATC 121
Query 195923 GAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGAT 195982
|||| ||||| |||||||| ||| | ||||| ||||| ||||| | |||||||| ||
Sbjct 122 GAAGAGGGTATCTTCGAAGTCAAGTCCACTGCCGGTGACACTCACTTGGGTGGTGAGGAC 181
Query 195983 TTCGA 195987
|| ||
Sbjct 182 TTTGA 186
>seq2131
Length=43390
Score = 93.3 bits (102), Expect = 6e-14
Identities = 153/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 198564 CTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAA 198623
||||||| || | || || || ||||| || || || || | ||| | || || |||
Sbjct 3357 CTTCTCGTTGGACCTCCCGGAACCGGTAAGACGCTCCTTGCCAGAGCTGTTGCTGGCGAA 3298
Query 198624 TCGAGTGTCCCCTT--TCTTCAGTGCTCCGCGGCGAGTTTCATCGAGATGTTCGTTGGTG 198681
| | || ||||| ||| || || | || ||||| | |||||| | ||| ||||
Sbjct 3297 GCAGGCGTTCCCTTCTTCTACA-TGTCCGGCTCTGAGTTCGA-CGAGATATACGTCGGTG 3240
Query 198682 TTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAATCAACCATGTATCA 198741
|||| |||||||| ||||| ||||| |||| || || |||| || |||| |||||
Sbjct 3239 TTGGAGCTAAGCGTGTCCGTGAACTGTTTGCCCAGGCCCGTGCCAAAGCACCAGCTATCA 3180
Query 198742 TCTTCATTGATGAGATTGACGCTGTTGGTAAGAAGCG 198778
||||||| || ||| |||| || ||||| |||||
Sbjct 3179 TCTTCATCGACGAGCTTGATGCCATTGGTGCCAAGCG 3143
>seq2769
Length=18169
Score = 89.7 bits (98), Expect = 7e-13
Identities = 79/99 (80%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
|||||||| || || || |||||||| || || ||||||||||| ||||| ||||| ||
Sbjct 10934 ATGCAAATTTTCGTCAAGACCCTTACGGGTAAGACTATCACCCTTGAGGTGGAGTCTTCC 10993
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAG 171960
||||| ||||| || |||| ||||||| || | ||||
Sbjct 10994 GACACTATCGACAATGTCAAGACCAAGATCCAGGGTAAG 11032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657835386525200
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