Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq1409 131 2e-25
>seq1409
Length=7126
Score = 131 bits (144), Expect = 2e-25
Identities = 159/214 (74%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AAC 24777
||||| || ||||| || || || || || || || ||| ||| |||||| | || |||
Sbjct 255 AAAACTCTGACCGGCAAGACCATCACTCTTGAGGTCGAATCCAGCGACACCATCGACAAC 314
Query 24778 GGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTT 24837
| || || || |||||| ||||||||||| || || || || || |||||| | |||||
Sbjct 315 GTGAAGACCAA-GATCCAGGACAAAGAAGGCATCCCGCCAGACCAGCAACGTCTCATCTT 373
Query 24838 TGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATC 24897
|| || |||||||| ||||| || | |||| || || |||||||||||||||||
Sbjct 374 CGCTGGAAAACAGCTCGAGGACGGCAGGACGCTGTCCGACTACAACATTCAAAAGGAATC 433
Query 24898 GACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||| | || |||| |||| ||||||
Sbjct 434 AACTCTCCACCTTGTCCTGCGTCTGCGTGGAGGC 467
Score = 129 bits (142), Expect = 5e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || ||||| || ||||| || |||||| ||| |
Sbjct 468 ATGCAGATCTTCGTCAAGACACTTACGGGCAAAACCATCACGCTGGAGGTAGAATCCAGC 527
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| |||| |||| || || ||||||||| ||||| ||||| || || || || ||
Sbjct 528 GACACGATAGACAACGTCAAGAC-AAAGATCCAGGACAAGGAAGGTATCCCACCAGACCA 586
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| | |||||||| || |||||||| ||||| | | |||| ||||| ||
Sbjct 587 GCAGCGTCTCATCTTTGCAGGAAAACAGCTCGAGGACGGCCGGACGCTGTCTGATTACAA 646
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || ||||| || | || ||||| |||| ||||| || ||
Sbjct 647 CATCCAGAAGGAGAGCACGTTGCATTTGGTCCTGCGGTTGCGAGGCGG 694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449879126079800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |