Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_022340.1 Length=29464 Score E Sequences producing significant alignments: (Bits) Value seq613 325 7e-85 >seq613 Length=305 Score = 325 bits (360), Expect = 7e-85 Identities = 225/255 (88%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 16734 GCTGGGGCACTATTTTTGTGTCTACAGGGGTTTTACAGGTTGTCGTCTAGGGTGTCTTCG 16793 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 255 GCTGGGGCACTCTTTTTGTGTCTACAGGGGTTTTACAGGTTGTCGTCTAGGGTGTCTTCG 196 Query 16794 AGTGTCTGTTGTAGGAGTGCACACTCGGCGAGGGTGTCTTCAGCCTGGTCGACAATGTTT 16853 |||||||| |||||||||||||| ||||||||||||| || ||||||||||||| ||||| Sbjct 195 AGTGTCTGGTGTAGGAGTGCACATTCGGCGAGGGTGTTTTTAGCCTGGTCGACAGTGTTT 136 Query 16854 TGTTTTGCTATGCCTGGATAGTTGTTGCGGTGATTGTAGATGGCTTCCAGAATGTTGTCT 16913 | ||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct 135 CGCGGGATGATGCCGGGATAGTTGTCGCGGTGATTGTAGATGGCTTCCAGAATGTTGTCT 76 Query 16914 GCCATGATTTGTAGTGTTAGGGCCTGGTTGGTGATGCATTCCAGCTCGTCTAGGGCGGCC 16973 |||||| | ||| |||| ||||||| ||||| | ||||||| |||| ||||| ||| Sbjct 75 GCCATGGTGGCGAGTTTTAGTGCCTGGTAGGTGAGGGTTTCCAGCCCGTCCAGGGCTGCC 16 Query 16974 TGGCTAGCCTCCGGC 16988 ||||||||||||||| Sbjct 15 TGGCTAGCCTCCGGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94159526752420