Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq1409 118 2e-21
>seq1409
Length=7126
Score = 118 bits (130), Expect = 2e-21
Identities = 149/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| | || |||||| || | ||| ||||| ||||| || || || || || || ||
Sbjct 466 CCTCCACGCAGACGCAGGACAAGGTGGAGAGTTGATTCCTTTTGAATGTTGTAGTCGGAC 407
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | || ||||| || || ||||||||||| ||||| || | ||| || ||||| ||
Sbjct 406 AGCGTCCTGCCGTCCTCGAGCTGTTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGCGGG 347
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| || || || ||||| | || || || || || || || | | ||| ||
Sbjct 346 ATGCCTTCTTTGTCCTGGATCTTGGTCTTCACGTTGTCGATGGTGTCGCTGGATTCGACC 287
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCA 82788
|| | ||| || |||||||| ||||
Sbjct 286 TCAAGAGTGATGGTCTTGCCGGTCA 262
Score = 84.2 bits (92), Expect = 4e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||| || || || || ||||| || ||||| || || || | | ||
Sbjct 160 ACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAGCGTCCGGCC 101
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||| || ||||||||||| || ||||| || | || || ||||| || || || |||||
Sbjct 100 GTCCTCGAGTTGTTTTCCTGCGAAGATCAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTT 41
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATC 82750
||||| ||||| | || || || || || || ||
Sbjct 40 GTCTTGGATCTTGGTCTTGACGTTGTCGATGGTGTC 5
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981785875813615
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |