Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1409 118 2e-21 >seq1409 Length=7126 Score = 118 bits (130), Expect = 2e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | || |||||| || | ||| ||||| ||||| || || || || || || || Sbjct 466 CCTCCACGCAGACGCAGGACAAGGTGGAGAGTTGATTCCTTTTGAATGTTGTAGTCGGAC 407 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | || ||||| || || ||||||||||| ||||| || | ||| || ||||| || Sbjct 406 AGCGTCCTGCCGTCCTCGAGCTGTTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGCGGG 347 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||| || || || ||||| | || || || || || || || | | ||| || Sbjct 346 ATGCCTTCTTTGTCCTGGATCTTGGTCTTCACGTTGTCGATGGTGTCGCTGGATTCGACC 287 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCA 82788 || | ||| || |||||||| |||| Sbjct 286 TCAAGAGTGATGGTCTTGCCGGTCA 262 Score = 84.2 bits (92), Expect = 4e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| || || || || ||||| || ||||| || || || | | || Sbjct 160 ACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAGCGTCCGGCC 101 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||| || ||||||||||| || ||||| || | || || ||||| || || || ||||| Sbjct 100 GTCCTCGAGTTGTTTTCCTGCGAAGATCAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTT 41 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATC 82750 ||||| ||||| | || || || || || || || Sbjct 40 GTCTTGGATCTTGGTCTTGACGTTGTCGATGGTGTC 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981785875813615