Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1409 134 1e-26 >seq1409 Length=7126 Score = 134 bits (148), Expect = 1e-26 Identities = 158/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGA 133512 ||||| | ||| ||| ||||| || |||||||| || ||| || || ||||||| Sbjct 673 AAATGCAACGTGCTCTCCTTCTGGATGTTGTAATCAGACAGCGTCCGGCCG--TCCTCGA 616 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 |||| || || || | ||||| ||||||||||| || ||||| ||||||||||| || Sbjct 615 GCTGTTTTCCTGCAAAGATGAGACGCTGCTGGTCTGGTGGGATACCTTCCTTGTCCTGGA 556 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||||| ||||| | || | ||||||| ||| || || || | |||| |||||||| Sbjct 555 TCTTTGTCTTGACGTTGTCTATCGTGTCGCTGGATTCTACCTCCAGCGTGATGGTTTTGC 496 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATGGCT 133664 | || || || || ||||| ||||||||| || Sbjct 495 CCGTAAGTGTCTTGACGAAGATCTGCATGCCT 464 Score = 107 bits (118), Expect = 2e-18 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || || || || || || ||||| ||| || ||| |||||||||||| || || Sbjct 436 GTTGATTCCTTTTGAATGTTGTAGTCGGACAGCGTCCTGCCGTCCTCGAGCTGTTTTCCA 377 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| || |||||||| || ||||||||||| ||||| |||||| ||| Sbjct 376 GCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCTTTGTCCTGGATCTTGGTCTTC 317 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | |||||| ||| || || || | |||| ||| ||||||||||||||| Sbjct 316 ACGTTGTCGATGGTGTCGCTGGATTCGACCTCAAGAGTGATGGTCTTGCCGGTCAGAGTT 257 Query 133644 TTTACGA 133650 || |||| Sbjct 256 TTCACGA 250 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/124 (76%), Gaps = 4/124 (3%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTG 133520 ||||||||| ||||| || || || ||| || ||| || || |||||||| || || Sbjct 142 GGTGGACTCCTTCTGGATGTTATAGTCGGACAGCGTCCGGCCG--TCCTCGAGTTGTTTT 85 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || || ||||||||||| || |||||||| |||||||| |||||| | Sbjct 84 CCTGCGAAGATCAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCTTGGATCTTGGTC 25 Query 133581 TTGA 133584 |||| Sbjct 24 TTGA 21 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483400949533400