Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1055 141 9e-29 >seq1055 Length=3912 Score = 141 bits (156), Expect = 9e-29 Identities = 357/542 (66%), Gaps = 3/542 (1%) Strand=Plus/Minus Query 147889 TCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGG 147945 || || ||||| || || | ||||| || | ||||| |||||| ||||||||| Sbjct 1993 TCAGCATGCCATGGCTCCAGGTAGATAGCAAAGGCACCAGGACGCTTGTTGCCGCCCTGG 1934 Query 147946 TCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTG 148005 ||||||| | | ||||||| ||||| || | ||||||| | | ||| | | | | Sbjct 1933 TCGACATATCTGGCGGTGTTGTTGAACACACGAAGCATGGGTACAATTCCGTTGGAGGAG 1874 Query 148006 CCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATG 148065 |||||||| | || | | ||| ||| || | ||| ||||||| ||| || Sbjct 1873 CCGTTGGTTCCAGCAATGTAGGATCCGGTGGCACGGATACGGTGGACGTTAAGGCCGATA 1814 Query 148066 CCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATG 148125 || ||| | |||||| || ||| || || ||| |||||| || ||||| Sbjct 1813 CCTCCGGCAGTCTTTGAGATCAAAGCACAGGTCTTCAGTGTGTCGTAGATACCTTCGATA 1754 Query 148126 CTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCC 148185 ||||| | || | | ||| | || || ||| ||||||||| | | ||||| || Sbjct 1753 CTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCATTTGCGGCTGCGGGGTTCCGGCA 1694 Query 148186 GAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCA 148245 ||| ||||||||| || || || || |||| || ||| | || || ||| Sbjct 1693 TTGAAGAGGGTGGGAGAGGCATGGGTGAAGTATTTCTGGGACATGAGATTGTATGTTTCA 1634 Query 148246 ATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGT 148305 || | | || | ||| |||||||| || || | ||| || ||||| | ||| |||||| Sbjct 1633 ATTACTTTCTCAACGTCCTCGCCGTGGATACCGACCGCAACTCGCATTATCATATGCTGT 1574 Query 148306 GGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAA 148365 || ||||||||||| | |||| | || || ||| |||| || || ||| | Sbjct 1573 GGCCGTTCGGCAACCTTGCCGTTGGTTCGTAGCAGGTATGACCTTTCAAGCGTCTTGAAG 1514 Query 148366 CCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCGCATCTAGTGTCTCAGCA 148425 || ||||||| ||| | ||| || | ||||| |||| |||| | ||| |||||| Sbjct 1513 CCGAAGTACTGGTAGTTAAAGTCACGGTCGTACACGATAGCCGAGTTGAGTTCTTCAGCA 1454 Query 148426 TG 148427 || Sbjct 1453 TG 1452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476591629152600