Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq2158 96.9 3e-15 >seq2158 Length=8959 Score = 96.9 bits (106), Expect = 3e-15 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||| | || || | ||| |||||| | |||| ||| ||||| || || | || || Sbjct 2556 GCTCAAGGAGGTTCTCGTTAACGATGCCATCGGAGGCGGCGAAGAAAGCCAAGACATGGG 2615 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||||||||||| | ||| || || | ||||||||||| | || |||||||| | Sbjct 2616 AGATGAAGAATCGTTCATCGTCATTGAGCCTGTTGTTCCAGTCGTGAATATCCTTGGAGA 2675 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 |||||||||||| | ||||| | || | | |||||||||||| ||||| |||| Sbjct 2676 GATCGATCTCTTCGGCAGTCCAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCC--AGAT 2733 Query 110892 CT 110893 || Sbjct 2734 CT 2735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445076123311200