Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_027295.1 Length=29806 Score E Sequences producing significant alignments: (Bits) Value seq613 379 4e-101 >seq613 Length=305 Score = 379 bits (420), Expect = 4e-101 Identities = 270/306 (88%), Gaps = 4/306 (1%) Strand=Plus/Minus Query 16685 GATATAGTTTGTGCCCCAGCGGT-GCTGCCACGTGTTGTGGTGGATGCT--GCTGGGGCA 16741 |||||||||||||||||||| | || |||| | ||| || ||||||||| Sbjct 305 GATATAGTTTGTGCCCCAGCAGCAGCCACCACAAAACACG-TGGCAGCACCGCTGGGGCA 247 Query 16742 CTATTTTTGTGTCTATAGGGGTTTTACAGGTTTTCGTCTAGGGTGTCTTCGAGTGTCTCG 16801 || |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| | Sbjct 246 CTCTTTTTGTGTCTACAGGGGTTTTACAGGTTGTCGTCTAGGGTGTCTTCGAGTGTCTGG 187 Query 16802 TGTAGGAGTGCACATTCGGCGAGGGTGTCTTTGCCCTGGTCTGCAATGTTTCGCGGGATG 16861 |||||||||||||||||||||||||||| ||| ||||||| || |||||||||||||| Sbjct 186 TGTAGGAGTGCACATTCGGCGAGGGTGTTTTTAGCCTGGTCGACAGTGTTTCGCGGGATG 127 Query 16862 ATGCCGGGATAGTTGTCGCGGTGATTGTAGATGGCTTCTAGCATGTTGTCTGCCATGGTG 16921 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 126 ATGCCGGGATAGTTGTCGCGGTGATTGTAGATGGCTTCCAGAATGTTGTCTGCCATGGTG 67 Query 16922 GCGAGTTTTAGCGCCTGGTAGGTGATGGTTTCTAGCCTGTCTAGGGCTGCCTGGCTAGCC 16981 ||||||||||| ||||||||||||| |||||| |||| ||| |||||||||||||||||| Sbjct 66 GCGAGTTTTAGTGCCTGGTAGGTGAGGGTTTCCAGCCCGTCCAGGGCTGCCTGGCTAGCC 7 Query 16982 TTCGGC 16987 | |||| Sbjct 6 TCCGGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 95253884060560