Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_027333.1 Length=29421 Score E Sequences producing significant alignments: (Bits) Value seq613 383 3e-102 >seq613 Length=305 Score = 383 bits (424), Expect = 3e-102 Identities = 232/245 (95%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 16719 GCTGGGGCACACTTTTTGTGTCTACAGGGGTTTTACAGGTTGTTGTCTAGGGTGTCTTCG 16778 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 255 GCTGGGGCACTCTTTTTGTGTCTACAGGGGTTTTACAGGTTGTCGTCTAGGGTGTCTTCG 196 Query 16779 AGTGTCTGGTGTAGGAGTGCGCATTCGGCGAGGGTGTCTTTAGCCTGGTCTACAATGCTT 16838 |||||||||||||||||||| |||||||||||||||| |||||||||||| ||| || || Sbjct 195 AGTGTCTGGTGTAGGAGTGCACATTCGGCGAGGGTGTTTTTAGCCTGGTCGACAGTGTTT 136 Query 16839 CGTTGAATGATGCCTGGATAGTTGTCGCGGTGATTGTAGATGGCTTCCAGAATGTTGTCT 16898 || | |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 135 CGCGGGATGATGCCGGGATAGTTGTCGCGGTGATTGTAGATGGCTTCCAGAATGTTGTCT 76 Query 16899 GCCATGGTGGCGAGTTTTAGTGCCTGGTAGGTGAGGGTTTCCAGCCCGTCTAGGGCCGCC 16958 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 75 GCCATGGTGGCGAGTTTTAGTGCCTGGTAGGTGAGGGTTTCCAGCCCGTCCAGGGCTGCC 16 Query 16959 TGGCT 16963 ||||| Sbjct 15 TGGCT 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94021932120110