Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_027346.1 Length=29327 Score E Sequences producing significant alignments: (Bits) Value seq613 307 2e-79 >seq613 Length=305 Score = 307 bits (340), Expect = 2e-79 Identities = 222/256 (87%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 16746 GCTGGGGCACACTTTTTGTGTCTACGGTATGGCTATGATTCGTTGTTGTCTATAGTTTCT 16805 |||||||||| |||||||||||||| | || | | | ||||| ||||| || ||| Sbjct 255 GCTGGGGCACTCTTTTTGTGTCTACAG---GGGTTTTACAGGTTGTCGTCTAGGGTGTCT 199 Query 16806 TCGAGTGTCTGGTGTAGGAGTGCACATTCGGCGAGGGTATCTTCGGCCTGGTCGACAATG 16865 |||||||||||||||||||||||||||||||||||||| | || |||||||||||| || Sbjct 198 TCGAGTGTCTGGTGTAGGAGTGCACATTCGGCGAGGGTGTTTTTAGCCTGGTCGACAGTG 139 Query 16866 TTTCGTTGGATGATGCCTGGATAGTTGTTTCGATGATTGTAGATGGCTTCCAGAATGTTG 16925 ||||| |||||||||| |||||||||| || ||||||||||||||||||||||||||| Sbjct 138 TTTCGCGGGATGATGCCGGGATAGTTGTCGCGGTGATTGTAGATGGCTTCCAGAATGTTG 79 Query 16926 TCTGCCATGGTGACGAGTTTTAGGGCCTGATAGGTGAGGCATTCCAGGCCGTCCAGGGGC 16985 |||||||||||| |||||||||| ||||| ||||||||| |||||| |||||||||| Sbjct 78 TCTGCCATGGTGGCGAGTTTTAGTGCCTGGTAGGTGAGGGTTTCCAGCCCGTCCAGGGCT 19 Query 16986 GCCTGGCTAGCCTCCG 17001 |||||||||||||||| Sbjct 18 GCCTGGCTAGCCTCCG 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 93721143854130