Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_027370.1 Length=29428 Score E Sequences producing significant alignments: (Bits) Value seq613 313 5e-81 >seq613 Length=305 Score = 313 bits (346), Expect = 5e-81 Identities = 224/255 (88%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 16728 GCTGGGGCACT-TTTTTGTGTCTACAGGGGTTT-ACAGGTTGTCGTCTAGGGTGTCTTCG 16785 ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 255 GCTGGGGCACTCTTTTTGTGTCTACAGGGGTTTTACAGGTTGTCGTCTAGGGTGTCTTCG 196 Query 16786 AGTGTCTGTTGTAGGAGTGAACACTCGGCGAGGGTGTCTTCAGCCTGGTCGACAATGTTT 16845 |||||||| |||||||||| ||| ||||||||||||| || ||||||||||||| ||||| Sbjct 195 AGTGTCTGGTGTAGGAGTGCACATTCGGCGAGGGTGTTTTTAGCCTGGTCGACAGTGTTT 136 Query 16846 TGTTTTGCTATGCCTGGATAGTTGTCGCGGTGATTGTAGATGGCTTCCAGAATGTTGTCT 16905 | ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 135 CGCGGGATGATGCCGGGATAGTTGTCGCGGTGATTGTAGATGGCTTCCAGAATGTTGTCT 76 Query 16906 GCCATGATTTGTAGTGTTAGGGCCTGGTTGGTGATGCATTCCAGCTCGTCTAGGGCGGCC 16965 |||||| | ||| |||| ||||||| ||||| | ||||||| |||| ||||| ||| Sbjct 75 GCCATGGTGGCGAGTTTTAGTGCCTGGTAGGTGAGGGTTTCCAGCCCGTCCAGGGCTGCC 16 Query 16966 TGGCTAGCCTCCGGC 16980 ||||||||||||||| Sbjct 15 TGGCTAGCCTCCGGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94044331246300