Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_027371.1 Length=29741 Score E Sequences producing significant alignments: (Bits) Value seq613 105 1e-18 >seq613 Length=305 Score = 105 bits (116), Expect = 1e-18 Identities = 60/61 (98%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 12832 TCGAAGACACCCTAGACGACAACCTGTAAAACCCCTGCAGACACAAAAAGAGTGCCCCAG 12891 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 195 TCGAAGACACCCTAGACGACAACCTGTAAAACCCCTGTAGACACAAAAAGAGTGCCCCAG 254 Query 12892 C 12892 | Sbjct 255 C 255 Score = 84.2 bits (92), Expect = 4e-12 Identities = 53/56 (95%), Gaps = 1/56 (2%) Strand=Plus/Minus Query 12883 GTGCCCCAGCAGCAGCCACCACACAA-ACATGGCAGCACCGCTGGGGCACTCTTTT 12937 ||||||||||||||||||||||| || || |||||||||||||||||||||||||| Sbjct 295 GTGCCCCAGCAGCAGCCACCACAAAACACGTGGCAGCACCGCTGGGGCACTCTTTT 240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 95045892174510