Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= NC_027371.1
Length=29741
Score E
Sequences producing significant alignments: (Bits) Value
seq613 105 1e-18
>seq613
Length=305
Score = 105 bits (116), Expect = 1e-18
Identities = 60/61 (98%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 12832 TCGAAGACACCCTAGACGACAACCTGTAAAACCCCTGCAGACACAAAAAGAGTGCCCCAG 12891
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 195 TCGAAGACACCCTAGACGACAACCTGTAAAACCCCTGTAGACACAAAAAGAGTGCCCCAG 254
Query 12892 C 12892
|
Sbjct 255 C 255
Score = 84.2 bits (92), Expect = 4e-12
Identities = 53/56 (95%), Gaps = 1/56 (2%)
Strand=Plus/Minus
Query 12883 GTGCCCCAGCAGCAGCCACCACACAA-ACATGGCAGCACCGCTGGGGCACTCTTTT 12937
||||||||||||||||||||||| || || ||||||||||||||||||||||||||
Sbjct 295 GTGCCCCAGCAGCAGCCACCACAAAACACGTGGCAGCACCGCTGGGGCACTCTTTT 240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 95045892174510
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |